myRT

myRT report for GCA_007113485.1_ASM711348v1

Download annotations/find similar RTs

Seq: CP041613.1 Streptomyces sp. S1D4-23 chromosome (12057712 bp)
Overview 1 RT 1: 600982-605614 bp 2 RT 2: 689973-696427 bp 3 RT 3: 709555-716958 bp 4 RT 4: 776354-782225 bp 5 RT 5: 824847-828594 bp 6 RT 6: 1231230-1236780 bp 7 RT 7: 4865455-4872240 bp 8 RT 8: 6451112-6456516 bp 9 RT 9: 7069967-7075944 bp 10 RT 10: 9384835-9388459 bp 11 RT 11: 10905109-10911438 bp Neighborhood of RT #1 [600982, 605616] InsE HTH_32 RVT-GII GIIM rve_3 PRK06196 Neighborhood of RT #2 [689973, 696462] MhpC RVT_N RVT-GII GIIM Nterm_IS4 DDE_Tnp_1 ABATE zf-CGNR Neighborhood of RT #3 [709555, 716958] CitA GAF SpoIIE HATPase_RsbW-like RVT_N RVT-GII GIIM His_Phos_1 Neighborhood of RT #4 [776354, 782242] SigX4 DUF772 RVT_N RVT-GII GIIM DDE_Tnp_1_6 Y1_Tnp Neighborhood of RT #5 [824847, 828594] InsE HTH_32 RVT-GII GIIM rve_3 Neighborhood of RT #6 [1231230, 1236848] DDE_Tnp_1_6 DDE_Tnp_1 RVT_N RVT-GII GIIM DUF772 InsQ Neighborhood of RT #7 [4865455, 4873184] COG3547 COG3547 RVT-GII GIIM DEDD_Tnp_IS110 YfjP Neighborhood of RT #8 [6451112, 6456542] HATPase_RsbW-like Cupin_5 RVT-GII GIIM CysA CysU Neighborhood of RT #9 [7069967, 7075988] PRK10457 YajQ_like RVT-GII GIIM DEDD_Tnp_IS110 Transposase_20 SDR_a5 Neighborhood of RT #10 [9384835, 9388647] mycothiol_MshB RVT-GII MRJP SnoaL_2 Neighborhood of RT #11 [10905109, 10911438] RICIN DDE_5 RVT-GII RVT-GII GIIM SufI Feature: gene Location: 600982-601395 bp Feature: domain Description: InsE Location: 601045-601336 bp Feature: domain Description: InsE Location: 601 045-601 336 bp Feature: gene Location: 601392-601880 bp Feature: domain Description: HTH_32 Location: 601527-601728 bp Feature: domain Description: HTH_32 Location: 601 527-601 728 bp Feature: gene Location: 601916-603076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602033-602693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602033-602693 bp Feature: domain Description: GIIM Note: maturase Location: 602771-602993 bp Feature: domain Description: GIIM Note: maturase Location: 602771 -602993 bp Feature: gene Location: 603848-604381 bp Feature: domain Description: rve_3 Location: 604004-604199 bp Feature: domain Description: rve_3 Location: 604004-6041 99 bp Feature: gene Location: 604630-605616 bp Feature: domain Description: PRK06196 Location: 604642-605614 bp Feature: domain Description: PRK061 96 Location: 604642-60561 4 bp Feature: gene Location: 689973-690758 bp Feature: domain Description: MhpC Location: 689994-690753 bp Feature: domain Description: MhpC Location: 689994-690753 bp Feature: gene Location: 691126-691725 bp Feature: gene Location: 691903-693696 bp Feature: RT Description: RVT_N Location: 691987-692224 bp Feature: RT Description: RVT_N Location: 691 987-692224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692284-692941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692284-692941 bp Feature: domain Description: GIIM Note: maturase Location: 692995-693226 bp Feature: domain Description: GIIM Note: maturase Location: 692995-693226 bp Feature: gene Location: 694299-695291 bp Feature: domain Description: Nterm_IS4 Location: 694356-694629 bp Feature: domain Description: Nterm_IS4 Location: 694356-694629 bp Feature: domain Description: DDE_Tnp_1 Location: 694779-695223 bp Feature: domain Description: DDE_Tnp_1 Location: 694779-695223 bp Feature: gene Location: 695809-696462 bp Feature: domain Description: ABATE Location: 695956-696259 bp Feature: domain Description: ABATE Location: 695956-696259 bp Feature: domain Description: zf-CGNR Location: 696313-696427 bp Feature: domain Description: zf-CGNR Location: 69631 3-696427 bp Feature: gene Location: 709555-712557 bp Feature: domain Description: CitA Location: 709909-710848 bp Feature: domain Description: CitA Location: 709909-71 0848 bp Feature: domain Description: GAF Location: 711133-711370 bp Feature: domain Description: GAF Location: 71 1 1 33-71 1 370 bp Feature: domain Description: SpoIIE Location: 711544-712120 bp Feature: domain Description: SpoIIE Location: 71 1 544-71 21 20 bp Feature: domain Description: HATPase_RsbW-like Location: 712255-712492 bp Feature: domain Description: HATPase_RsbW-like Location: 71 2255-71 2492 bp Feature: gene Location: 712648-712893 bp Feature: gene Location: 713370-715172 bp Feature: RT Description: RVT_N Location: 713454-713691 bp Feature: RT Description: RVT_N Location: 71 3454-71 3691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 713751-714408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 3751 -71 4408 bp Feature: domain Description: GIIM Note: maturase Location: 714459-714693 bp Feature: domain Description: GIIM Note: maturase Location: 71 4459-71 4693 bp Feature: gene Location: 715726-716364 bp Feature: domain Description: His_Phos_1 Location: 715762-716089 bp Feature: domain Description: His_Phos_1 Location: 71 5762-71 6089 bp Feature: gene Location: 716383-716958 bp Feature: gene Location: 776354-777277 bp Feature: domain Description: SigX4 Location: 776369-777212 bp Feature: domain Description: SigX4 Location: 776369-77721 2 bp Feature: gene Location: 777624-778028 bp Feature: domain Description: DUF772 Location: 777783-777903 bp Feature: domain Description: DUF772 Location: 777783-777903 bp Feature: gene Location: 778582-780384 bp Feature: RT Description: RVT_N Location: 778666-778903 bp Feature: RT Description: RVT_N Location: 778666-778903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778963-779620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778963-779620 bp Feature: domain Description: GIIM Note: maturase Location: 779671-779905 bp Feature: domain Description: GIIM Note: maturase Location: 779671 -779905 bp Feature: gene Location: 780132-781841 bp Feature: domain Description: DDE_Tnp_1_6 Location: 781392-781767 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 781 392-781 767 bp Feature: gene Location: 781931-782242 bp Feature: domain Description: Y1_Tnp Location: 781940-782225 bp Feature: domain Description: Y1 _Tnp Location: 781 940-782225 bp Feature: gene Location: 824847-825260 bp Feature: domain Description: InsE Location: 824910-825201 bp Feature: domain Description: InsE Location: 82491 0-825201 bp Feature: gene Location: 825257-825745 bp Feature: domain Description: HTH_32 Location: 825392-825593 bp Feature: domain Description: HTH_32 Location: 825392-825593 bp Feature: gene Location: 825781-826941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825898-826558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825898-826558 bp Feature: domain Description: GIIM Note: maturase Location: 826636-826858 bp Feature: domain Description: GIIM Note: maturase Location: 826636-826858 bp Feature: gene Location: 827713-828246 bp Feature: domain Description: rve_3 Location: 827869-828064 bp Feature: domain Description: rve_3 Location: 827869-828064 bp Feature: gene Location: 828334-828594 bp Feature: gene Location: 1231230-1231619 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1231242-1231545 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 231 242-1 231 545 bp Feature: gene Location: 1231701-1232561 bp Feature: domain Description: DDE_Tnp_1 Location: 1232196-1232520 bp Feature: domain Description: DDE_Tnp_1 Location: 1 2321 96-1 232520 bp Feature: gene Location: 1232681-1234483 bp Feature: RT Description: RVT_N Location: 1232765-1233002 bp Feature: RT Description: RVT_N Location: 1 232765-1 233002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1233062-1233719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 233062-1 23371 9 bp Feature: domain Description: GIIM Note: maturase Location: 1233770-1234004 bp Feature: domain Description: GIIM Note: maturase Location: 1 233770-1 234004 bp Feature: gene Location: 1235037-1236236 bp Feature: domain Description: DUF772 Location: 1235991-1236111 bp Feature: domain Description: DUF772 Location: 1 235991 -1 2361 1 1 bp Feature: gene Location: 1235667-1236848 bp Feature: domain Description: InsQ Location: 1235670-1236780 bp Feature: domain Description: InsQ Location: 1 235670-1 236780 bp Feature: gene Location: 4865455-4866339 bp Feature: gene Location: 4867329-4868345 bp Feature: domain Description: COG3547 Location: 4867347-4867584 bp Feature: domain Description: COG3547 Location: 4867347-4867584 bp Feature: domain Description: COG3547 Location: 4867617-4868202 bp Feature: domain Description: COG3547 Location: 486761 7-4868202 bp Feature: gene Location: 4868485-4869975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4868866-4869550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4868866-4869550 bp Feature: domain Description: GIIM Note: maturase Location: 4869619-4869847 bp Feature: domain Description: GIIM Note: maturase Location: 486961 9-4869847 bp Feature: gene Location: 4870489-4870746 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 4870516-4870714 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 487051 6-487071 4 bp Feature: gene Location: 4871430-4873184 bp Feature: domain Description: YfjP Location: 4871775-4872240 bp Feature: domain Description: YfjP Location: 4871 775-4872240 bp Feature: gene Location: 6451112-6451534 bp Feature: domain Description: HATPase_RsbW-like Location: 6451277-6451520 bp Feature: domain Description: HATPase_RsbW-like Location: 6451 277-6451 520 bp Feature: gene Location: 6451734-6452195 bp Feature: domain Description: Cupin_5 Location: 6451773-6452178 bp Feature: domain Description: Cupin_5 Location: 6451 773-64521 78 bp Feature: gene Location: 6452524-6453990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6452860-6453556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6452860-6453556 bp Feature: domain Description: GIIM Note: maturase Location: 6453628-6453847 bp Feature: domain Description: GIIM Note: maturase Location: 6453628-6453847 bp Feature: gene Location: 6454594-6455679 bp Feature: domain Description: CysA Location: 6454675-6455668 bp Feature: domain Description: CysA Location: 6454675-6455668 bp Feature: gene Location: 6455676-6456542 bp Feature: domain Description: CysU Location: 6455784-6456516 bp Feature: domain Description: CysU Location: 6455784-645651 6 bp Feature: gene Location: 7069967-7070233 bp Feature: domain Description: PRK10457 Location: 7069970-7070210 bp Feature: domain Description: PRK1 0457 Location: 7069970-707021 0 bp Feature: gene Location: 7070364-7070939 bp Feature: domain Description: YajQ_like Location: 7070463-7070937 bp Feature: domain Description: YajQ_like Location: 7070463-7070937 bp Feature: gene Location: 7071486-7072952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7071822-7072518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7071 822-707251 8 bp Feature: domain Description: GIIM Note: maturase Location: 7072590-7072809 bp Feature: domain Description: GIIM Note: maturase Location: 7072590-7072809 bp Feature: gene Location: 7073556-7074758 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 7073589-7074054 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 7073589-7074054 bp Feature: domain Description: Transposase_20 Location: 7074381-7074627 bp Feature: domain Description: Transposase_20 Location: 7074381 -7074627 bp Feature: gene Location: 7075332-7075988 bp Feature: domain Description: SDR_a5 Location: 7075338-7075944 bp Feature: domain Description: SDR_a5 Location: 7075338-7075944 bp Feature: gene Location: 9384835-9385716 bp Feature: domain Description: mycothiol_MshB Location: 9384913-9385711 bp Feature: domain Description: mycothiol_MshB Location: 938491 3-938571 1 bp Feature: gene Location: 9385911-9386075 bp Feature: gene Location: 9386126-9386350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9386132-9386327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93861 32-9386327 bp Feature: gene Location: 9386685-9387836 bp Feature: domain Description: MRJP Location: 9386988-9387747 bp Feature: domain Description: MRJP Location: 9386988-9387747 bp Feature: gene Location: 9388135-9388647 bp Feature: domain Description: SnoaL_2 Location: 9388171-9388459 bp Feature: domain Description: SnoaL_2 Location: 93881 71 -9388459 bp Feature: gene Location: 10905109-10905630 bp Feature: domain Description: RICIN Location: 10905160-10905424 bp Feature: domain Description: RICIN Location: 1 09051 60-1 0905424 bp Feature: gene Location: 10905944-10907371 bp Feature: domain Description: DDE_5 Location: 10906154-10906940 bp Feature: domain Description: DDE_5 Location: 1 09061 54-1 0906940 bp Feature: gene Location: 10908476-10909099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10908479-10908575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0908479-1 0908575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10908581-10908713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0908581 -1 090871 3 bp Feature: domain Description: GIIM Note: maturase Location: 10908794-10909016 bp Feature: domain Description: GIIM Note: maturase Location: 1 0908794-1 090901 6 bp Feature: gene Location: 10909354-10910979 bp Feature: domain Description: SufI Location: 10909372-10910974 bp Feature: domain Description: SufI Location: 1 0909372-1 091 0974 bp Feature: gene Location: 10911055-10911438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), HTH_32 (pfam13565), RVT-GII, GIIM (pfam08388), rve_3 (pfam13683), PRK06196 (oxidoreductase; Provisional), MhpC (COG0596), RVT_N (pfam13655), Nterm_IS4 (pfam13006), DDE_Tnp_1 (pfam01609)
ABATE (pfam07336), zf-CGNR (pfam11706), CitA (COG3290), GAF (smart00065), SpoIIE (pfam07228), HATPase_RsbW-like (cd16936), His_Phos_1 (pfam00300), SigX4 (TIGR02957), DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751)
Y1_Tnp (pfam01797), InsQ (COG0675), COG3547 (Transposase ), DEDD_Tnp_IS110 (pfam01548), YfjP (cd11383), Cupin_5 (pfam06172), CysA (COG1118), CysU (COG0555), PRK10457 (hypothetical protein; Provisional), YajQ_like (cl00723)
Transposase_20 (pfam02371), SDR_a5 (cd05243), mycothiol_MshB (TIGR03445), MRJP (pfam03022), SnoaL_2 (pfam12680), RICIN (smart00458), DDE_5 (pfam13546), SufI (COG2132)