myRT

myRT report for GCA_007113585.1_ASM711358v1

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Seq: CP041609.1 Streptomyces sp. S1D4-20 chromosome (11851257 bp)
Overview 1 RT 1: 431588-437684 bp 2 RT 2: 1272439-1277964 bp 3 RT 3: 1519258-1524237 bp 4 RT 4: 9387939-9392963 bp 5 RT 5: 10315810-10322709 bp Neighborhood of RT #1 [431588, 437695] InsQ RVT-GII GIIM COG3464 COG3464 Neighborhood of RT #2 [1272439, 1277964] PBP2_LTTR_aromatics_like adh_short_C2 RVT-GII GIIM COG3464 COG3464 Neighborhood of RT #3 [1519258, 1524237] Resolvase Recombinase Zn_ribbon_recom COG3905 RVT-GII GIIM UDG_F5_TTUDGB_like Neighborhood of RT #4 [9387939, 9393331] DUF4096 DDE_Tnp_1 RVT-GII DUF772 AccC Neighborhood of RT #5 [10315810, 10322709] DDE_5 HTH_32 DDE_3 RVT-GII RVT-GII GIIM SufI Feature: gene Location: 431588-433123 bp Feature: domain Description: InsQ Location: 431879-432989 bp Feature: domain Description: InsQ Location: 431 879-432989 bp Feature: gene Location: 433294-433473 bp Feature: gene Location: 434095-435570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434437-435133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434437-4351 33 bp Feature: domain Description: GIIM Note: maturase Location: 435208-435427 bp Feature: domain Description: GIIM Note: maturase Location: 435208-435427 bp Feature: gene Location: 435693-435980 bp Feature: gene Location: 436166-437695 bp Feature: domain Description: COG3464 Location: 436172-436817 bp Feature: domain Description: COG3464 Location: 4361 72-43681 7 bp Feature: domain Description: COG3464 Location: 437339-437684 bp Feature: domain Description: COG3464 Location: 437339-437684 bp Feature: gene Location: 1272439-1272936 bp Feature: domain Description: PBP2_LTTR_aromatics_like Location: 1272622-1272811 bp Feature: domain Description: PBP2_LTTR_aromatics_like Location: 1 272622-1 27281 1 bp Feature: domain Description: adh_short_C2 Location: 1272850-1272928 bp Feature: domain Description: adh_short_C2 Location: 1 272850-1 272928 bp Feature: gene Location: 1273341-1273574 bp Feature: gene Location: 1274364-1275839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274706-1275402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 274706-1 275402 bp Feature: domain Description: GIIM Note: maturase Location: 1275477-1275696 bp Feature: domain Description: GIIM Note: maturase Location: 1 275477-1 275696 bp Feature: gene Location: 1275962-1277491 bp Feature: domain Description: COG3464 Location: 1275968-1276613 bp Feature: domain Description: COG3464 Location: 1 275968-1 27661 3 bp Feature: domain Description: COG3464 Location: 1277135-1277480 bp Feature: domain Description: COG3464 Location: 1 2771 35-1 277480 bp Feature: gene Location: 1277677-1277964 bp Feature: gene Location: 1519258-1521105 bp Feature: domain Description: Resolvase Location: 1519270-1519708 bp Feature: domain Description: Resolvase Location: 1 51 9270-1 51 9708 bp Feature: domain Description: Recombinase Location: 1519798-1520161 bp Feature: domain Description: Recombinase Location: 1 51 9798-1 5201 61 bp Feature: domain Description: Zn_ribbon_recom Location: 1520200-1520392 bp Feature: domain Description: Zn_ribbon_recom Location: 1 520200-1 520392 bp Feature: gene Location: 1521238-1521585 bp Feature: domain Description: COG3905 Location: 1521439-1521556 bp Feature: domain Description: COG3905 Location: 1 521 439-1 521 556 bp Feature: gene Location: 1520956-1522440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1521568-1522009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 521 568-1 522009 bp Feature: domain Description: GIIM Note: maturase Location: 1522081-1522300 bp Feature: domain Description: GIIM Note: maturase Location: 1 522081 -1 522300 bp Feature: gene Location: 1523151-1523933 bp Feature: domain Description: UDG_F5_TTUDGB_like Location: 1523253-1523889 bp Feature: domain Description: UDG_F5_TTUDGB_like Location: 1 523253-1 523889 bp Feature: gene Location: 1523974-1524237 bp Feature: gene Location: 9387939-9388496 bp Feature: domain Description: DUF4096 Location: 9388248-9388482 bp Feature: domain Description: DUF4096 Location: 9388248-9388482 bp Feature: gene Location: 9388500-9389045 bp Feature: domain Description: DDE_Tnp_1 Location: 9388533-9388902 bp Feature: domain Description: DDE_Tnp_1 Location: 9388533-9388902 bp Feature: gene Location: 9389434-9390903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9389755-9390439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9389755-9390439 bp Feature: gene Location: 9391434-9391736 bp Feature: domain Description: DUF772 Location: 9391542-9391662 bp Feature: domain Description: DUF772 Location: 9391 542-9391 662 bp Feature: gene Location: 9392009-9393331 bp Feature: domain Description: AccC Location: 9392258-9392963 bp Feature: domain Description: AccC Location: 9392258-9392963 bp Feature: gene Location: 10315810-10317039 bp Feature: domain Description: DDE_5 Location: 10315822-10316608 bp Feature: domain Description: DDE_5 Location: 1 031 5822-1 031 6608 bp Feature: gene Location: 10317154-10318230 bp Feature: domain Description: HTH_32 Location: 10317346-10317556 bp Feature: domain Description: HTH_32 Location: 1 031 7346-1 031 7556 bp Feature: domain Description: DDE_3 Location: 10317679-10317991 bp Feature: domain Description: DDE_3 Location: 1 031 7679-1 031 7991 bp Feature: gene Location: 10319474-10320097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10319477-10319573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 031 9477-1 031 9573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10319579-10319711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 031 9579-1 031 971 1 bp Feature: domain Description: GIIM Note: maturase Location: 10319792-10320014 bp Feature: domain Description: GIIM Note: maturase Location: 1 031 9792-1 032001 4 bp Feature: gene Location: 10320352-10321977 bp Feature: domain Description: SufI Location: 10320370-10321972 bp Feature: domain Description: SufI Location: 1 0320370-1 0321 972 bp Feature: gene Location: 10322053-10322709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), COG3464 (Transposase ), PBP2_LTTR_aromatics_like (cd08414), adh_short_C2 (pfam13561), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), COG3905 (Predicted transcriptional regulator )
UDG_F5_TTUDGB_like, DUF4096 (pfam13340), DDE_Tnp_1 (pfam01609), DUF772 (pfam05598), AccC (COG0439), DDE_5 (pfam13546), HTH_32 (pfam13565), DDE_3 (pfam13358), SufI (COG2132)