myRT

myRT report for GCA_007115015.1_ASM711501v1

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Seq: MUIX01000001.1 Wolbachia endosymbiont of Laodelphax striatellus strain wstri scaffold1, whole genome shotgun sequence (1600254 bp)
Overview 1 RT 1: 12009-16396 bp 2 RT 2: 20890-32568 bp 3 RT 3: 38813-42383 bp 4 RT 4: 71899-76652 bp 5 RT 5: 95586-99780 bp 6 RT 6: 116550-120702 bp 7 RT 7: 174610-178997 bp 8 RT 8: 188330-191512 bp 9 RT 9: 201371-214563 bp 10 RT 10: 255627-261342 bp 11 RT 11: 314152-324783 bp 12 RT 12: 327933-333729 bp 13 RT 13: 370613-375632 bp 14 RT 14: 639896-646241 bp 15 RT 15: 653934-664047 bp 16 RT 16: 691683-698017 bp 17 RT 17: 779401-783463 bp 18 RT 18: 968215-971891 bp 19 RT 19: 1058707-1063136 bp 20 RT 20: 1236749-1243885 bp 21 RT 21: 1286791-1290960 bp 22 RT 22: 1312647-1316799 bp 23 RT 23: 1339720-1356131 bp 24 RT 24: 1410231-1416877 bp 25 RT 25: 1472027-1483455 bp 26 RT 26: 1486284-1492160 bp 27 RT 27: 1548039-1552414 bp 28 RT 28: 1554947-1572288 bp 29 RT 29: 1574306-1587521 bp 30 RT 30: 1590315-1597332 bp Neighborhood of RT #1 [12009, 16396] Recombinase Zn_ribbon_recom Recombinase HTH_17 RVT-GII GIIM COG4653 Neighborhood of RT #2 [20890, 32570] RVT_N RVT-GII RVT-GII GIIM RVT-GII GIIM Metallophos RVT_N RVT-GII RVT-GII GIIM RVT-GII GIIM HTH_XRE T_den_put_tspse Neighborhood of RT #3 [38813, 42388] RVT-GII GIIM RVT-GII GIIM PRK00048 Neighborhood of RT #4 [71899, 76696] Latrotoxin_C ANK Ank_4 RVT-GII GIIM RuvC Neighborhood of RT #5 [95586, 99812] RadC RVT-GII D Phage_tail_X Neighborhood of RT #6 [116550, 120702] AAA_24 AAA_25 RVT-GII GIIM repA Neighborhood of RT #7 [174610, 178997] Recombinase Zn_ribbon_recom Recombinase HTH_17 RVT-GII GIIM COG4653 Neighborhood of RT #8 [188330, 191880] RuvC Bro-N dinD RVT-GII Neighborhood of RT #9 [201371, 214568] ANK ANK ANK ANK Ank_2 ANK OTU AAA_22 TPR_12 TPR_12 RVT_N RVT-GII RVT-GII GIIM PDDEXK_2 Phage_tube Neighborhood of RT #10 [255627, 261347] PHA02517 HTH_XRE T_den_put_tspse HTH_XRE RVT-GII GIIM PRK00024 Neighborhood of RT #11 [314152, 325151] PRK05704 RVT-GII GIIM Ank_2 Ank_2 ATPase_2 ANK ANK Neighborhood of RT #12 [327933, 333737] HTH_XRE T_den_put_tspse HTH_XRE T_den_put_tspse PDDEXK_2 RVT-GII GIIM RVT-GII GIIM MgtE Neighborhood of RT #13 [370613, 375632] Transposase_20 RVT-GII GIIM Neighborhood of RT #14 [639896, 646241] ANK BeeE RVT_N RVT-GII GIIM Neighborhood of RT #15 [653934, 664047] rplI PRK07492 RVT-GII GIIM G1PDH PRK13009 RVT-GII Neighborhood of RT #16 [691683, 698017] Lig RVT-GII GIIM DDE_Tnp_1_3 Neighborhood of RT #17 [779401, 784023] RVT-GII GIIM ANK Ank_4 ANK ANK Neighborhood of RT #18 [968215, 971908] MgtE_N MgtE_N RVT-GII GIIM MgtE_N InsE Neighborhood of RT #19 [1058707, 1063153] RVT-GII GIIM DDE_Tnp_1_3 COG4649 Neighborhood of RT #20 [1236749, 1243890] dcd RVT-GII GIIM RVT-GII GIIM RVT_N RVT-GII PRK08815 Neighborhood of RT #21 [1286791, 1291004] RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom ANK ANK Neighborhood of RT #22 [1312647, 1316799] AAA_24 AAA_25 RVT-GII GIIM repA Neighborhood of RT #23 [1339720, 1356328] PDDEXK_2 RVT_N RVT-GII YkfC T_den_put_tspse ANK ANK ANK ANK ANK Ank_5 ANK ANK ANK ANK ANK Latrotoxin_C Neighborhood of RT #24 [1410231, 1416882] NhaC DnaJ ANK ANK RVT_N RVT-GII GIIM ANK KOG3309 Neighborhood of RT #25 [1472027, 1483455] RVT-GII GIIM COG3547 COG3293 PDDEXK_2 KOG4595 RVT_N RVT-GII GIIM HTH_XRE T_den_put_tspse HTH_XRE Neighborhood of RT #26 [1486284, 1492165] ANK ANK D RVT-GII GIIM major_cap_HK97 PRK00230 Neighborhood of RT #27 [1548039, 1552414] DDE_Tnp_1_3 RVT-GII GIIM Neighborhood of RT #28 [1554947, 1572293] PDDEXK_9 RVT-GII ANK ANK Ank_2 ANK Latrotoxin_C PDDEXK_2 YadD RVT_N RVT-GII GIIM rnhA mutL Neighborhood of RT #29 [1574306, 1587553] RVT-GII GIIM HTH_XRE HTH_XRE HTH_3 T_den_put_tspse HTH_3 T_den_put_tspse Pat17_PNPLA8_PNPLA9_like RVT-GII GIIM PLDc_Nuc ANK D RVT-GII D Phage_tail_X Neighborhood of RT #30 [1590315, 1597364] Phage_TAC_7 Phage_tube RVT-GII GIIM PLDc_Nuc ANK D RVT-GII D Phage_tail_X Feature: gene Location: 12009-12323 bp Feature: gene Location: 12462-13760 bp Feature: domain Description: Recombinase Location: 12555-12633 bp Feature: domain Description: Recombinase Location: 1 2555-1 2633 bp Feature: domain Description: Zn_ribbon_recom Location: 12690-12840 bp Feature: domain Description: Zn_ribbon_recom Location: 1 2690-1 2840 bp Feature: domain Description: Recombinase Location: 13380-13500 bp Feature: domain Description: Recombinase Location: 1 3380-1 3500 bp Feature: domain Description: HTH_17 Location: 13563-13644 bp Feature: domain Description: HTH_1 7 Location: 1 3563-1 3644 bp Feature: gene Location: 13754-14980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13958-14618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3958-1 461 8 bp Feature: domain Description: GIIM Note: maturase Location: 14699-14894 bp Feature: domain Description: GIIM Note: maturase Location: 1 4699-1 4894 bp Feature: gene Location: 15429-15767 bp Feature: domain Description: COG4653 Location: 15531-15756 bp Feature: domain Description: COG4653 Location: 1 5531 -1 5756 bp Feature: gene Location: 15842-16396 bp Feature: gene Location: 20890-21852 bp Feature: gene Location: 22294-22437 bp Feature: gene Location: 22475-23326 bp Feature: RT Description: RVT_N Location: 22526-22763 bp Feature: RT Description: RVT_N Location: 22526-22763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22814-23318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2281 4-2331 8 bp Feature: gene Location: 23645-23794 bp Feature: gene Location: 23840-25084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24044-24701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24044-24701 bp Feature: domain Description: GIIM Note: maturase Location: 24782-25001 bp Feature: domain Description: GIIM Note: maturase Location: 24782-25001 bp Feature: gene Location: 25054-25872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25153-25315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 53-2531 5 bp Feature: domain Description: GIIM Note: maturase Location: 25366-25600 bp Feature: domain Description: GIIM Note: maturase Location: 25366-25600 bp Feature: gene Location: 26083-27324 bp Feature: domain Description: Metallophos Location: 26386-27043 bp Feature: domain Description: Metallophos Location: 26386-27043 bp Feature: gene Location: 27966-28166 bp Feature: gene Location: 28421-28564 bp Feature: gene Location: 28602-29453 bp Feature: RT Description: RVT_N Location: 28653-28890 bp Feature: RT Description: RVT_N Location: 28653-28890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28941-29445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28941 -29445 bp Feature: gene Location: 29772-29921 bp Feature: gene Location: 29967-31211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30171-30828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 71 -30828 bp Feature: domain Description: GIIM Note: maturase Location: 30909-31128 bp Feature: domain Description: GIIM Note: maturase Location: 30909-31 1 28 bp Feature: gene Location: 31181-32230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31280-31442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 280-31 442 bp Feature: domain Description: GIIM Note: maturase Location: 31493-31727 bp Feature: domain Description: GIIM Note: maturase Location: 31 493-31 727 bp Feature: gene Location: 32214-32570 bp Feature: domain Description: HTH_XRE Location: 32226-32322 bp Feature: domain Description: HTH_XRE Location: 32226-32322 bp Feature: domain Description: T_den_put_tspse Location: 32352-32568 bp Feature: domain Description: T_den_put_tspse Location: 32352-32568 bp Feature: gene Location: 38813-40057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39017-39674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3901 7-39674 bp Feature: domain Description: GIIM Note: maturase Location: 39755-39974 bp Feature: domain Description: GIIM Note: maturase Location: 39755-39974 bp Feature: gene Location: 40027-40845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40126-40288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401 26-40288 bp Feature: domain Description: GIIM Note: maturase Location: 40339-40573 bp Feature: domain Description: GIIM Note: maturase Location: 40339-40573 bp Feature: gene Location: 41093-41383 bp Feature: gene Location: 41600-42388 bp Feature: domain Description: PRK00048 Location: 41606-42383 bp Feature: domain Description: PRK00048 Location: 41 606-42383 bp Feature: gene Location: 71899-72894 bp Feature: domain Description: Latrotoxin_C Location: 72373-72769 bp Feature: domain Description: Latrotoxin_C Location: 72373-72769 bp Feature: gene Location: 72950-73381 bp Feature: domain Description: ANK Location: 72977-73289 bp Feature: domain Description: ANK Location: 72977-73289 bp Feature: domain Description: Ank_4 Location: 73298-73379 bp Feature: domain Description: Ank_4 Location: 73298-73379 bp Feature: gene Location: 73883-75109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74087-74747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74087-74747 bp Feature: domain Description: GIIM Note: maturase Location: 74828-75023 bp Feature: domain Description: GIIM Note: maturase Location: 74828-75023 bp Feature: gene Location: 76388-76696 bp Feature: domain Description: RuvC Location: 76406-76652 bp Feature: domain Description: RuvC Location: 76406-76652 bp Feature: gene Location: 95586-96143 bp Feature: gene Location: 96432-96803 bp Feature: domain Description: RadC Location: 96438-96789 bp Feature: domain Description: RadC Location: 96438-96789 bp Feature: gene Location: 97136-98449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97391-98081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97391 -98081 bp Feature: gene Location: 98892-99602 bp Feature: domain Description: D Location: 98916-99549 bp Feature: domain Description: D Location: 9891 6-99549 bp Feature: gene Location: 99603-99812 bp Feature: domain Description: Phage_tail_X Location: 99624-99780 bp Feature: domain Description: Phage_tail_X Location: 99624-99780 bp Feature: gene Location: 116550-117359 bp Feature: domain Description: AAA_24 Location: 116595-117276 bp Feature: domain Description: AAA_24 Location: 1 1 6595-1 1 7276 bp Feature: gene Location: 117394-117891 bp Feature: domain Description: AAA_25 Location: 117457-117850 bp Feature: domain Description: AAA_25 Location: 1 1 7457-1 1 7850 bp Feature: gene Location: 118348-119757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118633-119272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8633-1 1 9272 bp Feature: domain Description: GIIM Note: maturase Location: 119344-119563 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 9344-1 1 9563 bp Feature: gene Location: 119766-120188 bp Feature: domain Description: repA Location: 119841-120015 bp Feature: domain Description: repA Location: 1 1 9841 -1 2001 5 bp Feature: gene Location: 120208-120702 bp Feature: gene Location: 174610-174924 bp Feature: gene Location: 175063-176361 bp Feature: domain Description: Recombinase Location: 175156-175234 bp Feature: domain Description: Recombinase Location: 1 751 56-1 75234 bp Feature: domain Description: Zn_ribbon_recom Location: 175291-175441 bp Feature: domain Description: Zn_ribbon_recom Location: 1 75291 -1 75441 bp Feature: domain Description: Recombinase Location: 175981-176101 bp Feature: domain Description: Recombinase Location: 1 75981 -1 761 01 bp Feature: domain Description: HTH_17 Location: 176164-176245 bp Feature: domain Description: HTH_1 7 Location: 1 761 64-1 76245 bp Feature: gene Location: 176355-177581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176559-177219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 76559-1 7721 9 bp Feature: domain Description: GIIM Note: maturase Location: 177300-177495 bp Feature: domain Description: GIIM Note: maturase Location: 1 77300-1 77495 bp Feature: gene Location: 178030-178368 bp Feature: domain Description: COG4653 Location: 178132-178357 bp Feature: domain Description: COG4653 Location: 1 781 32-1 78357 bp Feature: gene Location: 178443-178997 bp Feature: gene Location: 188330-188785 bp Feature: domain Description: RuvC Location: 188507-188741 bp Feature: domain Description: RuvC Location: 1 88507-1 88741 bp Feature: gene Location: 189422-190153 bp Feature: domain Description: Bro-N Location: 189527-189650 bp Feature: domain Description: Bro-N Location: 1 89527-1 89650 bp Feature: domain Description: dinD Location: 189764-190109 bp Feature: domain Description: dinD Location: 1 89764-1 901 09 bp Feature: gene Location: 190567-191880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190822-191512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 90822-1 91 51 2 bp Feature: gene Location: 201371-202924 bp Feature: domain Description: ANK Location: 201383-201590 bp Feature: domain Description: ANK Location: 201 383-201 590 bp Feature: domain Description: ANK Location: 201596-201890 bp Feature: domain Description: ANK Location: 201 596-201 890 bp Feature: domain Description: ANK Location: 201896-202169 bp Feature: domain Description: ANK Location: 201 896-2021 69 bp Feature: domain Description: ANK Location: 202211-202484 bp Feature: domain Description: ANK Location: 20221 1 -202484 bp Feature: domain Description: Ank_2 Location: 202493-202655 bp Feature: domain Description: Ank_2 Location: 202493-202655 bp Feature: gene Location: 203569-209280 bp Feature: domain Description: ANK Location: 204463-204631 bp Feature: domain Description: ANK Location: 204463-204631 bp Feature: domain Description: OTU Location: 205093-205294 bp Feature: domain Description: OTU Location: 205093-205294 bp Feature: domain Description: AAA_22 Location: 206671-207073 bp Feature: domain Description: AAA_22 Location: 206671 -207073 bp Feature: domain Description: TPR_12 Location: 207715-207871 bp Feature: domain Description: TPR_1 2 Location: 20771 5-207871 bp Feature: domain Description: TPR_12 Location: 208474-208645 bp Feature: domain Description: TPR_1 2 Location: 208474-208645 bp Feature: gene Location: 210046-213087 bp Feature: RT Description: RVT_N Location: 210097-210334 bp Feature: RT Description: RVT_N Location: 21 0097-21 0334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210385-210889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 0385-21 0889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212386-212530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 2386-21 2530 bp Feature: domain Description: GIIM Note: maturase Location: 212581-212815 bp Feature: domain Description: GIIM Note: maturase Location: 21 2581 -21 281 5 bp Feature: gene Location: 213523-213966 bp Feature: domain Description: PDDEXK_2 Location: 213550-213769 bp Feature: domain Description: PDDEXK_2 Location: 21 3550-21 3769 bp Feature: gene Location: 214062-214568 bp Feature: domain Description: Phage_tube Location: 214071-214563 bp Feature: domain Description: Phage_tube Location: 21 4071 -21 4563 bp Feature: gene Location: 255627-256421 bp Feature: domain Description: PHA02517 Location: 255630-256395 bp Feature: domain Description: PHA0251 7 Location: 255630-256395 bp Feature: gene Location: 256603-257511 bp Feature: domain Description: HTH_XRE Location: 256633-256804 bp Feature: domain Description: HTH_XRE Location: 256633-256804 bp Feature: domain Description: T_den_put_tspse Location: 256957-257050 bp Feature: domain Description: T_den_put_tspse Location: 256957-257050 bp Feature: domain Description: HTH_XRE Location: 257092-257263 bp Feature: domain Description: HTH_XRE Location: 257092-257263 bp Feature: gene Location: 257630-258901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257834-258494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257834-258494 bp Feature: domain Description: GIIM Note: maturase Location: 258575-258800 bp Feature: domain Description: GIIM Note: maturase Location: 258575-258800 bp Feature: gene Location: 259474-260589 bp Feature: gene Location: 260691-261347 bp Feature: domain Description: PRK00024 Location: 260709-261342 bp Feature: domain Description: PRK00024 Location: 260709-261 342 bp Feature: gene Location: 314152-315690 bp Feature: gene Location: 315846-317018 bp Feature: domain Description: PRK05704 Location: 315858-317016 bp Feature: domain Description: PRK05704 Location: 31 5858-31 701 6 bp Feature: gene Location: 317309-318580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317513-318173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 751 3-31 81 73 bp Feature: domain Description: GIIM Note: maturase Location: 318254-318479 bp Feature: domain Description: GIIM Note: maturase Location: 31 8254-31 8479 bp Feature: gene Location: 320036-320536 bp Feature: domain Description: Ank_2 Location: 320060-320348 bp Feature: domain Description: Ank_2 Location: 320060-320348 bp Feature: domain Description: Ank_2 Location: 320351-320504 bp Feature: domain Description: Ank_2 Location: 320351 -320504 bp Feature: gene Location: 320880-325151 bp Feature: domain Description: ATPase_2 Location: 322275-322509 bp Feature: domain Description: ATPase_2 Location: 322275-322509 bp Feature: domain Description: ANK Location: 324543-324654 bp Feature: domain Description: ANK Location: 324543-324654 bp Feature: domain Description: ANK Location: 324699-324783 bp Feature: domain Description: ANK Location: 324699-324783 bp Feature: gene Location: 327933-328889 bp Feature: domain Description: HTH_XRE Location: 327996-328158 bp Feature: domain Description: HTH_XRE Location: 327996-3281 58 bp Feature: domain Description: T_den_put_tspse Location: 328158-328404 bp Feature: domain Description: T_den_put_tspse Location: 3281 58-328404 bp Feature: domain Description: HTH_XRE Location: 328440-328611 bp Feature: domain Description: HTH_XRE Location: 328440-32861 1 bp Feature: domain Description: T_den_put_tspse Location: 328644-328872 bp Feature: domain Description: T_den_put_tspse Location: 328644-328872 bp Feature: gene Location: 328976-329254 bp Feature: domain Description: PDDEXK_2 Location: 329003-329222 bp Feature: domain Description: PDDEXK_2 Location: 329003-329222 bp Feature: gene Location: 329350-330594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329554-330211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329554-33021 1 bp Feature: domain Description: GIIM Note: maturase Location: 330292-330511 bp Feature: domain Description: GIIM Note: maturase Location: 330292-33051 1 bp Feature: gene Location: 330564-331382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330663-330825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330663-330825 bp Feature: domain Description: GIIM Note: maturase Location: 330876-331110 bp Feature: domain Description: GIIM Note: maturase Location: 330876-331 1 1 0 bp Feature: gene Location: 331765-331998 bp Feature: gene Location: 332367-333737 bp Feature: domain Description: MgtE Location: 332415-333729 bp Feature: domain Description: MgtE Location: 33241 5-333729 bp Feature: gene Location: 370613-371110 bp Feature: domain Description: Transposase_20 Location: 370700-370952 bp Feature: domain Description: Transposase_20 Location: 370700-370952 bp Feature: gene Location: 371342-371779 bp Feature: gene Location: 372161-373387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372365-373025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372365-373025 bp Feature: domain Description: GIIM Note: maturase Location: 373106-373301 bp Feature: domain Description: GIIM Note: maturase Location: 3731 06-373301 bp Feature: gene Location: 374041-374289 bp Feature: gene Location: 374661-375632 bp Feature: gene Location: 639896-640888 bp Feature: domain Description: ANK Location: 639941-640271 bp Feature: domain Description: ANK Location: 639941 -640271 bp Feature: gene Location: 640940-641854 bp Feature: domain Description: BeeE Location: 640949-641840 bp Feature: domain Description: BeeE Location: 640949-641 840 bp Feature: gene Location: 642493-643974 bp Feature: RT Description: RVT_N Location: 642544-642784 bp Feature: RT Description: RVT_N Location: 642544-642784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 642832-643474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 642832-643474 bp Feature: domain Description: GIIM Note: maturase Location: 643531-643762 bp Feature: domain Description: GIIM Note: maturase Location: 643531 -643762 bp Feature: gene Location: 644004-644258 bp Feature: gene Location: 644661-646241 bp Feature: gene Location: 653934-654458 bp Feature: domain Description: rplI Location: 653937-654375 bp Feature: domain Description: rplI Location: 653937-654375 bp Feature: gene Location: 654571-655863 bp Feature: domain Description: PRK07492 Location: 654574-655861 bp Feature: domain Description: PRK07492 Location: 654574-655861 bp Feature: gene Location: 656510-657736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 656714-657374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65671 4-657374 bp Feature: domain Description: GIIM Note: maturase Location: 657455-657650 bp Feature: domain Description: GIIM Note: maturase Location: 657455-657650 bp Feature: gene Location: 658354-659619 bp Feature: domain Description: G1PDH Location: 658426-659605 bp Feature: domain Description: G1 PDH Location: 658426-659605 bp Feature: gene Location: 659662-660858 bp Feature: domain Description: PRK13009 Location: 659674-660787 bp Feature: domain Description: PRK1 3009 Location: 659674-660787 bp Feature: gene Location: 661003-662316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661258-661948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661 258-661 948 bp Feature: gene Location: 662829-663167 bp Feature: gene Location: 663502-664047 bp Feature: gene Location: 691683-693638 bp Feature: domain Description: Lig Location: 691695-693636 bp Feature: domain Description: Lig Location: 691 695-693636 bp Feature: gene Location: 693743-694846 bp Feature: gene Location: 695050-696321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 695254-695914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 695254-69591 4 bp Feature: domain Description: GIIM Note: maturase Location: 695995-696220 bp Feature: domain Description: GIIM Note: maturase Location: 695995-696220 bp Feature: gene Location: 696903-697778 bp Feature: domain Description: DDE_Tnp_1_3 Location: 697224-697680 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 697224-697680 bp Feature: gene Location: 697850-698017 bp Feature: gene Location: 779401-779571 bp Feature: gene Location: 779596-780189 bp Feature: gene Location: 780198-781667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780543-781182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780543-781 1 82 bp Feature: domain Description: GIIM Note: maturase Location: 781254-781473 bp Feature: domain Description: GIIM Note: maturase Location: 781 254-781 473 bp Feature: gene Location: 782064-782603 bp Feature: domain Description: ANK Location: 782139-782412 bp Feature: domain Description: ANK Location: 7821 39-78241 2 bp Feature: domain Description: Ank_4 Location: 782430-782535 bp Feature: domain Description: Ank_4 Location: 782430-782535 bp Feature: gene Location: 782854-784023 bp Feature: domain Description: ANK Location: 782896-783076 bp Feature: domain Description: ANK Location: 782896-783076 bp Feature: domain Description: ANK Location: 783112-783463 bp Feature: domain Description: ANK Location: 7831 1 2-783463 bp Feature: gene Location: 968215-968667 bp Feature: gene Location: 968713-969381 bp Feature: domain Description: MgtE_N Location: 968818-969046 bp Feature: domain Description: MgtE_N Location: 96881 8-969046 bp Feature: domain Description: MgtE_N Location: 969073-969226 bp Feature: domain Description: MgtE_N Location: 969073-969226 bp Feature: gene Location: 969375-970601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 969579-970239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 969579-970239 bp Feature: domain Description: GIIM Note: maturase Location: 970320-970515 bp Feature: domain Description: GIIM Note: maturase Location: 970320-97051 5 bp Feature: gene Location: 971135-971680 bp Feature: domain Description: MgtE_N Location: 971423-971663 bp Feature: domain Description: MgtE_N Location: 971 423-971 663 bp Feature: gene Location: 971771-971908 bp Feature: domain Description: InsE Location: 971774-971891 bp Feature: domain Description: InsE Location: 971 774-971 891 bp Feature: gene Location: 1058707-1058850 bp Feature: gene Location: 1058868-1059026 bp Feature: gene Location: 1059156-1060427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1059360-1060020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 059360-1 060020 bp Feature: domain Description: GIIM Note: maturase Location: 1060101-1060326 bp Feature: domain Description: GIIM Note: maturase Location: 1 0601 01 -1 060326 bp Feature: gene Location: 1061014-1061886 bp Feature: domain Description: DDE_Tnp_1_3 Location: 1061335-1061791 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 1 061 335-1 061 791 bp Feature: gene Location: 1062569-1063153 bp Feature: domain Description: COG4649 Location: 1062776-1063136 bp Feature: domain Description: COG4649 Location: 1 062776-1 0631 36 bp Feature: gene Location: 1236749-1237306 bp Feature: domain Description: dcd Location: 1236758-1237295 bp Feature: domain Description: dcd Location: 1 236758-1 237295 bp Feature: gene Location: 1237307-1238332 bp Feature: gene Location: 1238561-1239379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1238660-1238822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 238660-1 238822 bp Feature: domain Description: GIIM Note: maturase Location: 1238873-1239107 bp Feature: domain Description: GIIM Note: maturase Location: 1 238873-1 2391 07 bp Feature: gene Location: 1239349-1240593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1239553-1240210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 239553-1 24021 0 bp Feature: domain Description: GIIM Note: maturase Location: 1240291-1240510 bp Feature: domain Description: GIIM Note: maturase Location: 1 240291 -1 24051 0 bp Feature: gene Location: 1240639-1240788 bp Feature: gene Location: 1241107-1241958 bp Feature: RT Description: RVT_N Location: 1241158-1241395 bp Feature: RT Description: RVT_N Location: 1 241 1 58-1 241 395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1241446-1241950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 241 446-1 241 950 bp Feature: gene Location: 1242394-1242594 bp Feature: gene Location: 1242808-1243890 bp Feature: domain Description: PRK08815 Location: 1242820-1243885 bp Feature: domain Description: PRK0881 5 Location: 1 242820-1 243885 bp Feature: gene Location: 1286791-1287312 bp Feature: gene Location: 1287554-1287712 bp Feature: gene Location: 1287747-1288988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287951-1288611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 287951 -1 28861 1 bp Feature: domain Description: GIIM Note: maturase Location: 1288686-1288911 bp Feature: domain Description: GIIM Note: maturase Location: 1 288686-1 28891 1 bp Feature: gene Location: 1289017-1290243 bp Feature: domain Description: Resolvase Location: 1289029-1289467 bp Feature: domain Description: Resolvase Location: 1 289029-1 289467 bp Feature: domain Description: Recombinase Location: 1289554-1289887 bp Feature: domain Description: Recombinase Location: 1 289554-1 289887 bp Feature: domain Description: Zn_ribbon_recom Location: 1289935-1290124 bp Feature: domain Description: Zn_ribbon_recom Location: 1 289935-1 2901 24 bp Feature: gene Location: 1290534-1291004 bp Feature: domain Description: ANK Location: 1290567-1290654 bp Feature: domain Description: ANK Location: 1 290567-1 290654 bp Feature: domain Description: ANK Location: 1290711-1290960 bp Feature: domain Description: ANK Location: 1 29071 1 -1 290960 bp Feature: gene Location: 1312647-1313456 bp Feature: domain Description: AAA_24 Location: 1312692-1313373 bp Feature: domain Description: AAA_24 Location: 1 31 2692-1 31 3373 bp Feature: gene Location: 1313491-1313988 bp Feature: domain Description: AAA_25 Location: 1313554-1313947 bp Feature: domain Description: AAA_25 Location: 1 31 3554-1 31 3947 bp Feature: gene Location: 1314445-1315854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1314730-1315369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 4730-1 31 5369 bp Feature: domain Description: GIIM Note: maturase Location: 1315441-1315660 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 5441 -1 31 5660 bp Feature: gene Location: 1315863-1316285 bp Feature: domain Description: repA Location: 1315938-1316112 bp Feature: domain Description: repA Location: 1 31 5938-1 31 61 1 2 bp Feature: gene Location: 1316305-1316799 bp Feature: gene Location: 1339720-1340163 bp Feature: domain Description: PDDEXK_2 Location: 1339747-1339966 bp Feature: domain Description: PDDEXK_2 Location: 1 339747-1 339966 bp Feature: gene Location: 1340418-1340561 bp Feature: gene Location: 1340599-1342146 bp Feature: RT Description: RVT_N Location: 1340650-1340893 bp Feature: RT Description: RVT_N Location: 1 340650-1 340893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1340938-1341589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 340938-1 341 589 bp Feature: domain Description: YkfC Location: 1341589-1341922 bp Feature: domain Description: YkfC Location: 1 341 589-1 341 922 bp Feature: gene Location: 1342500-1342925 bp Feature: domain Description: T_den_put_tspse Location: 1342566-1342908 bp Feature: domain Description: T_den_put_tspse Location: 1 342566-1 342908 bp Feature: gene Location: 1343255-1356328 bp Feature: domain Description: ANK Location: 1352234-1352594 bp Feature: domain Description: ANK Location: 1 352234-1 352594 bp Feature: domain Description: ANK Location: 1352642-1352882 bp Feature: domain Description: ANK Location: 1 352642-1 352882 bp Feature: domain Description: ANK Location: 1352909-1353179 bp Feature: domain Description: ANK Location: 1 352909-1 3531 79 bp Feature: domain Description: ANK Location: 1353185-1353452 bp Feature: domain Description: ANK Location: 1 3531 85-1 353452 bp Feature: domain Description: ANK Location: 1353464-1353716 bp Feature: domain Description: ANK Location: 1 353464-1 35371 6 bp Feature: domain Description: Ank_5 Location: 1353734-1353872 bp Feature: domain Description: Ank_5 Location: 1 353734-1 353872 bp Feature: domain Description: ANK Location: 1353941-1354289 bp Feature: domain Description: ANK Location: 1 353941 -1 354289 bp Feature: domain Description: ANK Location: 1354340-1354418 bp Feature: domain Description: ANK Location: 1 354340-1 35441 8 bp Feature: domain Description: ANK Location: 1354421-1354796 bp Feature: domain Description: ANK Location: 1 354421 -1 354796 bp Feature: domain Description: ANK Location: 1354823-1355045 bp Feature: domain Description: ANK Location: 1 354823-1 355045 bp Feature: domain Description: ANK Location: 1355177-1355519 bp Feature: domain Description: ANK Location: 1 3551 77-1 35551 9 bp Feature: domain Description: Latrotoxin_C Location: 1355777-1356131 bp Feature: domain Description: Latrotoxin_C Location: 1 355777-1 3561 31 bp Feature: gene Location: 1410231-1411529 bp Feature: domain Description: NhaC Location: 1410237-1411503 bp Feature: domain Description: NhaC Location: 1 41 0237-1 41 1 503 bp Feature: gene Location: 1411772-1413319 bp Feature: domain Description: DnaJ Location: 1411805-1412057 bp Feature: domain Description: DnaJ Location: 1 41 1 805-1 41 2057 bp Feature: domain Description: ANK Location: 1412606-1412849 bp Feature: domain Description: ANK Location: 1 41 2606-1 41 2849 bp Feature: domain Description: ANK Location: 1412984-1413212 bp Feature: domain Description: ANK Location: 1 41 2984-1 41 321 2 bp Feature: gene Location: 1413840-1415321 bp Feature: RT Description: RVT_N Location: 1413891-1414131 bp Feature: RT Description: RVT_N Location: 1 41 3891 -1 41 41 31 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1414179-1414821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 41 79-1 41 4821 bp Feature: domain Description: GIIM Note: maturase Location: 1414878-1415109 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 4878-1 41 51 09 bp Feature: gene Location: 1415351-1416295 bp Feature: domain Description: ANK Location: 1415636-1415936 bp Feature: domain Description: ANK Location: 1 41 5636-1 41 5936 bp Feature: gene Location: 1416535-1416882 bp Feature: domain Description: KOG3309 Location: 1416547-1416877 bp Feature: domain Description: KOG3309 Location: 1 41 6547-1 41 6877 bp Feature: gene Location: 1472027-1472482 bp Feature: gene Location: 1472537-1473013 bp Feature: gene Location: 1473209-1474450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1473413-1474073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 47341 3-1 474073 bp Feature: domain Description: GIIM Note: maturase Location: 1474148-1474373 bp Feature: domain Description: GIIM Note: maturase Location: 1 4741 48-1 474373 bp Feature: gene Location: 1476317-1476460 bp Feature: gene Location: 1476523-1477470 bp Feature: domain Description: COG3547 Location: 1476550-1477459 bp Feature: domain Description: COG3547 Location: 1 476550-1 477459 bp Feature: gene Location: 1478514-1478810 bp Feature: domain Description: COG3293 Location: 1478538-1478802 bp Feature: domain Description: COG3293 Location: 1 478538-1 478802 bp Feature: gene Location: 1479043-1480122 bp Feature: domain Description: PDDEXK_2 Location: 1479205-1479889 bp Feature: domain Description: PDDEXK_2 Location: 1 479205-1 479889 bp Feature: domain Description: KOG4595 Location: 1479898-1480033 bp Feature: domain Description: KOG4595 Location: 1 479898-1 480033 bp Feature: gene Location: 1480119-1481600 bp Feature: RT Description: RVT_N Location: 1480170-1480410 bp Feature: RT Description: RVT_N Location: 1 4801 70-1 48041 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1480458-1481100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 480458-1 481 1 00 bp Feature: domain Description: GIIM Note: maturase Location: 1481157-1481388 bp Feature: domain Description: GIIM Note: maturase Location: 1 481 1 57-1 481 388 bp Feature: gene Location: 1482330-1483259 bp Feature: domain Description: HTH_XRE Location: 1482366-1482528 bp Feature: domain Description: HTH_XRE Location: 1 482366-1 482528 bp Feature: domain Description: T_den_put_tspse Location: 1482528-1482774 bp Feature: domain Description: T_den_put_tspse Location: 1 482528-1 482774 bp Feature: domain Description: HTH_XRE Location: 1482810-1482981 bp Feature: domain Description: HTH_XRE Location: 1 48281 0-1 482981 bp Feature: gene Location: 1483300-1483455 bp Feature: gene Location: 1486284-1486802 bp Feature: domain Description: ANK Location: 1486377-1486479 bp Feature: domain Description: ANK Location: 1 486377-1 486479 bp Feature: domain Description: ANK Location: 1486485-1486761 bp Feature: domain Description: ANK Location: 1 486485-1 486761 bp Feature: gene Location: 1486851-1487816 bp Feature: domain Description: D Location: 1486854-1487808 bp Feature: domain Description: D Location: 1 486854-1 487808 bp Feature: gene Location: 1488474-1489700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1488678-1489338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 488678-1 489338 bp Feature: domain Description: GIIM Note: maturase Location: 1489419-1489614 bp Feature: domain Description: GIIM Note: maturase Location: 1 48941 9-1 48961 4 bp Feature: gene Location: 1489785-1490714 bp Feature: domain Description: major_cap_HK97 Location: 1489809-1490706 bp Feature: domain Description: major_cap_HK97 Location: 1 489809-1 490706 bp Feature: gene Location: 1491485-1492165 bp Feature: domain Description: PRK00230 Location: 1491491-1492160 bp Feature: domain Description: PRK00230 Location: 1 491 491 -1 4921 60 bp Feature: gene Location: 1548039-1548911 bp Feature: domain Description: DDE_Tnp_1_3 Location: 1548360-1548816 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 1 548360-1 54881 6 bp Feature: gene Location: 1549305-1549454 bp Feature: gene Location: 1549498-1550769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1549702-1550362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 549702-1 550362 bp Feature: domain Description: GIIM Note: maturase Location: 1550443-1550668 bp Feature: domain Description: GIIM Note: maturase Location: 1 550443-1 550668 bp Feature: gene Location: 1550858-1551001 bp Feature: gene Location: 1551047-1552414 bp Feature: gene Location: 1554947-1556428 bp Feature: gene Location: 1556440-1560807 bp Feature: domain Description: PDDEXK_9 Location: 1557184-1557409 bp Feature: domain Description: PDDEXK_9 Location: 1 5571 84-1 557409 bp Feature: gene Location: 1561281-1562594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561536-1562226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 561 536-1 562226 bp Feature: gene Location: 1562936-1566022 bp Feature: domain Description: ANK Location: 1563716-1563995 bp Feature: domain Description: ANK Location: 1 56371 6-1 563995 bp Feature: domain Description: ANK Location: 1564091-1564373 bp Feature: domain Description: ANK Location: 1 564091 -1 564373 bp Feature: domain Description: Ank_2 Location: 1564382-1564559 bp Feature: domain Description: Ank_2 Location: 1 564382-1 564559 bp Feature: domain Description: ANK Location: 1564568-1564841 bp Feature: domain Description: ANK Location: 1 564568-1 564841 bp Feature: domain Description: Latrotoxin_C Location: 1565453-1565810 bp Feature: domain Description: Latrotoxin_C Location: 1 565453-1 56581 0 bp Feature: gene Location: 1566345-1567373 bp Feature: domain Description: PDDEXK_2 Location: 1566507-1567191 bp Feature: domain Description: PDDEXK_2 Location: 1 566507-1 5671 91 bp Feature: domain Description: YadD Location: 1567206-1567362 bp Feature: domain Description: YadD Location: 1 567206-1 567362 bp Feature: gene Location: 1567370-1568851 bp Feature: RT Description: RVT_N Location: 1567421-1567661 bp Feature: RT Description: RVT_N Location: 1 567421 -1 567661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1567709-1568351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 567709-1 568351 bp Feature: domain Description: GIIM Note: maturase Location: 1568408-1568639 bp Feature: domain Description: GIIM Note: maturase Location: 1 568408-1 568639 bp Feature: gene Location: 1570031-1570603 bp Feature: domain Description: rnhA Location: 1570037-1570379 bp Feature: domain Description: rnhA Location: 1 570037-1 570379 bp Feature: gene Location: 1570449-1572293 bp Feature: domain Description: mutL Location: 1570452-1572288 bp Feature: domain Description: mutL Location: 1 570452-1 572288 bp Feature: gene Location: 1574306-1575502 bp Feature: gene Location: 1575882-1576031 bp Feature: gene Location: 1576075-1577346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1576279-1576939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 576279-1 576939 bp Feature: domain Description: GIIM Note: maturase Location: 1577020-1577245 bp Feature: domain Description: GIIM Note: maturase Location: 1 577020-1 577245 bp Feature: gene Location: 1577464-1578366 bp Feature: domain Description: HTH_XRE Location: 1577494-1577656 bp Feature: domain Description: HTH_XRE Location: 1 577494-1 577656 bp Feature: domain Description: HTH_XRE Location: 1577944-1578112 bp Feature: domain Description: HTH_XRE Location: 1 577944-1 5781 1 2 bp Feature: gene Location: 1578456-1579382 bp Feature: domain Description: HTH_3 Location: 1578522-1578657 bp Feature: domain Description: HTH_3 Location: 1 578522-1 578657 bp Feature: domain Description: T_den_put_tspse Location: 1578825-1578918 bp Feature: domain Description: T_den_put_tspse Location: 1 578825-1 57891 8 bp Feature: domain Description: HTH_3 Location: 1578981-1579134 bp Feature: domain Description: HTH_3 Location: 1 578981 -1 5791 34 bp Feature: domain Description: T_den_put_tspse Location: 1579143-1579374 bp Feature: domain Description: T_den_put_tspse Location: 1 5791 43-1 579374 bp Feature: gene Location: 1579811-1580143 bp Feature: gene Location: 1580222-1581238 bp Feature: domain Description: Pat17_PNPLA8_PNPLA9_like Location: 1580339-1581188 bp Feature: domain Description: Pat1 7_PNPLA8_PNPLA9_like Location: 1 580339-1 581 1 88 bp Feature: gene Location: 1581451-1582692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1581655-1582315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 581 655-1 58231 5 bp Feature: domain Description: GIIM Note: maturase Location: 1582390-1582615 bp Feature: domain Description: GIIM Note: maturase Location: 1 582390-1 58261 5 bp Feature: gene Location: 1583127-1583489 bp Feature: domain Description: PLDc_Nuc Location: 1583208-1583454 bp Feature: domain Description: PLDc_Nuc Location: 1 583208-1 583454 bp Feature: gene Location: 1583490-1583711 bp Feature: gene Location: 1583926-1584462 bp Feature: domain Description: ANK Location: 1584046-1584382 bp Feature: domain Description: ANK Location: 1 584046-1 584382 bp Feature: gene Location: 1584475-1584636 bp Feature: domain Description: D Location: 1584481-1584616 bp Feature: domain Description: D Location: 1 584481 -1 58461 6 bp Feature: gene Location: 1584879-1586192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1585134-1585824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5851 34-1 585824 bp Feature: gene Location: 1586666-1587343 bp Feature: domain Description: D Location: 1586690-1587317 bp Feature: domain Description: D Location: 1 586690-1 58731 7 bp Feature: gene Location: 1587344-1587553 bp Feature: domain Description: Phage_tail_X Location: 1587365-1587521 bp Feature: domain Description: Phage_tail_X Location: 1 587365-1 587521 bp Feature: gene Location: 1590315-1590572 bp Feature: domain Description: Phage_TAC_7 Location: 1590324-1590549 bp Feature: domain Description: Phage_TAC_7 Location: 1 590324-1 590549 bp Feature: gene Location: 1590655-1591161 bp Feature: domain Description: Phage_tube Location: 1590664-1591156 bp Feature: domain Description: Phage_tube Location: 1 590664-1 591 1 56 bp Feature: gene Location: 1591262-1592503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1591466-1592126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 591 466-1 5921 26 bp Feature: domain Description: GIIM Note: maturase Location: 1592201-1592426 bp Feature: domain Description: GIIM Note: maturase Location: 1 592201 -1 592426 bp Feature: gene Location: 1592938-1593300 bp Feature: domain Description: PLDc_Nuc Location: 1593019-1593265 bp Feature: domain Description: PLDc_Nuc Location: 1 59301 9-1 593265 bp Feature: gene Location: 1593301-1593522 bp Feature: gene Location: 1593737-1594273 bp Feature: domain Description: ANK Location: 1593857-1594193 bp Feature: domain Description: ANK Location: 1 593857-1 5941 93 bp Feature: gene Location: 1594286-1594447 bp Feature: domain Description: D Location: 1594292-1594427 bp Feature: domain Description: D Location: 1 594292-1 594427 bp Feature: gene Location: 1594690-1596003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1594945-1595635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 594945-1 595635 bp Feature: gene Location: 1596477-1597154 bp Feature: domain Description: D Location: 1596501-1597128 bp Feature: domain Description: D Location: 1 596501 -1 5971 28 bp Feature: gene Location: 1597155-1597364 bp Feature: domain Description: Phage_tail_X Location: 1597176-1597332 bp Feature: domain Description: Phage_tail_X Location: 1 5971 76-1 597332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), COG4653 (Predicted phage phi-C31 gp36 major capsid-like protein ), RVT_N (pfam13655), Metallophos (pfam00149), HTH_XRE (smart00530), T_den_put_tspse (TIGR01784)
PRK00048 (dihydrodipicolinate reductase; Provisional), Latrotoxin_C (pfam15658), ANK (smart00248), Ank_4 (pfam13637), RuvC (pfam02075), RadC (pfam04002), D (PHA02561), Phage_tail_X (pfam05489), AAA_24 (pfam13479), AAA_25 (pfam13481)
repA, Bro-N (smart01040), dinD (PRK11525), Ank_2 (pfam12796), OTU (pfam02338), AAA_22 (pfam13401), TPR_12 (pfam13424), PDDEXK_2 (pfam12784), Phage_tube (pfam04985), PHA02517 (putative transposase OrfB; Reviewed)
PRK00024 (DNA repair protein RadC), PRK05704 (2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase), ATPase_2 (pfam01637), MgtE (pfam01769), Transposase_20 (pfam02371), BeeE (COG4695), rplI (PRK00137), PRK07492 (adenylosuccinate lyase; Provisional), G1PDH (cd08175), PRK13009 (succinyl-diaminopimelate desuccinylase; Reviewed)
Lig (COG0272), DDE_Tnp_1_3 (pfam13612), MgtE_N (smart00924), InsE (COG2963), COG4649 (Uncharacterized protein ), dcd (PRK00416), PRK08815 (GTP cyclohydrolase II RibA), Resolvase (smart00857), YkfC (COG3344), Ank_5 (pfam13857)
NhaC (COG1757), DnaJ (smart00271), KOG3309 (KOG3309, Ferredoxin ), COG3547 (Transposase ), COG3293 (Transposase ), KOG4595 (KOG4595, Uncharacterized conserved protein ), major_cap_HK97 (TIGR01554), PRK00230 (orotidine-5'-phosphate decarboxylase), PDDEXK_9 (pfam08011), YadD (COG5464)
rnhA (PRK13907), mutL (PRK00095), HTH_3 (pfam01381), Pat17_PNPLA8_PNPLA9_like (cd07199), PLDc_Nuc (cd09170), Phage_TAC_7 (pfam10109)

Seq: MUIX01000002.1 Wolbachia endosymbiont of Laodelphax striatellus strain wstri scaffold2, whole genome shotgun sequence (186128 bp)
Overview 1 RT 1: 14032-22572 bp 2 RT 2: 60819-73026 bp 3 RT 3: 106579-112495 bp 4 RT 4: 152165-161219 bp Neighborhood of RT #1 [14032, 22589] PRK00024 RVT-GII HTH_XRE HTH_XRE RVT_N RVT-GII GIIM T_den_put_tspse Neighborhood of RT #2 [60819, 73040] LRR_RI PRK05711 DNA_pol_III_epsilon_Ecoli_like RVT-GII PRK07078 repA AAA_25 repA RVT-GII GIIM AAA_24 sigma70-ECF Neighborhood of RT #3 [106579, 112497] HTH_3 T_den_put_tspse HTH_3 T_den_put_tspse HTH_XRE HTH_XRE T_den_put_tspse RVT-GII GIIM PRK00024 Neighborhood of RT #4 [152165, 161305] RVT-GII GIIM T_den_put_tspse ANK ANK ANK ANK ANK KOG0509 ANK ANK bioA RVT-GII GIIM Feature: gene Location: 14032-14589 bp Feature: gene Location: 14878-15405 bp Feature: domain Description: PRK00024 Location: 14896-15394 bp Feature: domain Description: PRK0002 4 Location: 14896-15394 bp Feature: gene Location: 15576-16889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15831-16521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15831-1652 1 bp Feature: gene Location: 17746-18582 bp Feature: domain Description: HTH_XRE Location: 17809-17971 bp Feature: domain Description: HTH_XRE Location: 17809-17971 bp Feature: domain Description: HTH_XRE Location: 18253-18424 bp Feature: domain Description: HTH_XRE Location: 182 53-1842 4 bp Feature: gene Location: 19278-20759 bp Feature: RT Description: RVT_N Location: 19329-19569 bp Feature: RT Description: RVT_N Location: 1932 9-19569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19617-20259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19617-2 02 59 bp Feature: domain Description: GIIM Note: maturase Location: 20316-20547 bp Feature: domain Description: GIIM Note: maturase Location: 2 0316-2 0547 bp Feature: gene Location: 21159-21344 bp Feature: gene Location: 21795-22589 bp Feature: domain Description: T_den_put_tspse Location: 21927-22572 bp Feature: domain Description: T_den_put_tspse Location: 2 192 7-2 2 572 bp Feature: gene Location: 60819-61595 bp Feature: domain Description: LRR_RI Location: 60900-61284 bp Feature: domain Description: LRR_RI Location: 60900-612 84 bp Feature: domain Description: PRK05711 Location: 61440-61536 bp Feature: domain Description: PRK05711 Location: 61440-61536 bp Feature: gene Location: 61729-61953 bp Feature: domain Description: DNA_pol_III_epsilon_Ecoli_like Location: 61744-61930 bp Feature: domain Description: DNA_pol_III_epsilon_Ecoli_like Location: 61744-61930 bp Feature: gene Location: 62464-63777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62719-63409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 719-63409 bp Feature: gene Location: 65125-67245 bp Feature: domain Description: PRK07078 Location: 65143-66091 bp Feature: domain Description: PRK07078 Location: 65143-66091 bp Feature: domain Description: repA Location: 66100-66673 bp Feature: domain Description: repA Location: 66100-66673 bp Feature: gene Location: 67281-68249 bp Feature: domain Description: AAA_25 Location: 67533-67944 bp Feature: domain Description: AAA_2 5 Location: 67533-67944 bp Feature: gene Location: 68953-69507 bp Feature: domain Description: repA Location: 68968-69337 bp Feature: domain Description: repA Location: 68968-69337 bp Feature: gene Location: 69881-70030 bp Feature: gene Location: 70074-71345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70278-70938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702 78-70938 bp Feature: domain Description: GIIM Note: maturase Location: 71019-71244 bp Feature: domain Description: GIIM Note: maturase Location: 71019-712 44 bp Feature: gene Location: 71655-72464 bp Feature: domain Description: AAA_24 Location: 71700-72381 bp Feature: domain Description: AAA_2 4 Location: 71700-72 381 bp Feature: gene Location: 72549-73040 bp Feature: domain Description: sigma70-ECF Location: 72612-73026 bp Feature: domain Description: sigma70-ECF Location: 72 612 -7302 6 bp Feature: gene Location: 106579-107514 bp Feature: domain Description: HTH_3 Location: 106645-106777 bp Feature: domain Description: HTH_3 Location: 106645-106777 bp Feature: domain Description: T_den_put_tspse Location: 106948-107041 bp Feature: domain Description: T_den_put_tspse Location: 106948-107041 bp Feature: domain Description: HTH_3 Location: 107104-107257 bp Feature: domain Description: HTH_3 Location: 107104-1072 57 bp Feature: domain Description: T_den_put_tspse Location: 107359-107500 bp Feature: domain Description: T_den_put_tspse Location: 107359-107500 bp Feature: gene Location: 107604-108512 bp Feature: domain Description: HTH_XRE Location: 107634-107796 bp Feature: domain Description: HTH_XRE Location: 107634-107796 bp Feature: domain Description: HTH_XRE Location: 108084-108252 bp Feature: domain Description: HTH_XRE Location: 108084-1082 52 bp Feature: domain Description: T_den_put_tspse Location: 108261-108507 bp Feature: domain Description: T_den_put_tspse Location: 1082 61-108507 bp Feature: gene Location: 108630-109901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108834-109494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108834-109494 bp Feature: domain Description: GIIM Note: maturase Location: 109575-109800 bp Feature: domain Description: GIIM Note: maturase Location: 109575-109800 bp Feature: gene Location: 110474-111661 bp Feature: gene Location: 111832-112497 bp Feature: domain Description: PRK00024 Location: 111859-112495 bp Feature: domain Description: PRK0002 4 Location: 111859-112 495 bp Feature: gene Location: 152165-152542 bp Feature: gene Location: 152797-152940 bp Feature: gene Location: 154132-154950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154231-154393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1542 31-154393 bp Feature: domain Description: GIIM Note: maturase Location: 154444-154678 bp Feature: domain Description: GIIM Note: maturase Location: 154444-154678 bp Feature: gene Location: 155304-155708 bp Feature: domain Description: T_den_put_tspse Location: 155370-155700 bp Feature: domain Description: T_den_put_tspse Location: 155370-155700 bp Feature: gene Location: 155731-156147 bp Feature: gene Location: 156301-158940 bp Feature: domain Description: ANK Location: 156352-156697 bp Feature: domain Description: ANK Location: 156352 -156697 bp Feature: domain Description: ANK Location: 156709-156907 bp Feature: domain Description: ANK Location: 156709-156907 bp Feature: domain Description: ANK Location: 156928-157312 bp Feature: domain Description: ANK Location: 15692 8-157312 bp Feature: domain Description: ANK Location: 157324-157618 bp Feature: domain Description: ANK Location: 15732 4-157618 bp Feature: domain Description: ANK Location: 157642-158023 bp Feature: domain Description: ANK Location: 157642 -15802 3 bp Feature: domain Description: KOG0509 Location: 158035-158230 bp Feature: domain Description: KOG0509 Location: 158035-1582 30 bp Feature: domain Description: ANK Location: 158236-158533 bp Feature: domain Description: ANK Location: 1582 36-158533 bp Feature: domain Description: ANK Location: 158545-158674 bp Feature: domain Description: ANK Location: 158545-158674 bp Feature: gene Location: 159163-159630 bp Feature: domain Description: bioA Location: 159271-159616 bp Feature: domain Description: bioA Location: 1592 71-159616 bp Feature: gene Location: 160079-161305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160283-160943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1602 83-160943 bp Feature: domain Description: GIIM Note: maturase Location: 161024-161219 bp Feature: domain Description: GIIM Note: maturase Location: 16102 4-1612 19 bp Sorry, 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Associated domains:myRT PRK00024 (DNA repair protein RadC), RVT-GII, HTH_XRE (smart00530), RVT_N (pfam13655), GIIM (pfam08388), T_den_put_tspse (TIGR01784), LRR_RI (smart00368), PRK05711 (DNA polymerase III subunit epsilon; Provisional), DNA_pol_III_epsilon_Ecoli_like (cd06131), PRK07078 (hypothetical protein; Validated)
repA, AAA_25 (pfam13481), AAA_24 (pfam13479), sigma70-ECF (TIGR02937), HTH_3 (pfam01381), ANK (smart00248), KOG0509 (KOG0509, Ankyrin repeat and DHHC-type Zn-finger domain containing proteins ), bioA (TIGR00508)