myRT

myRT report for GCA_007115575.1_ASM711557v1

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Seq: VIYB01000290.1 (336 bp)
Overview 1 RT 1: 163-310 bp Neighborhood of RT #1 [163, 333] RVT-DGRs Feature: gene Location: 163-333 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 175-310 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 75-31 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VIYB01000530.1 (278 bp)
Overview 1 RT 1: 1-244 bp Neighborhood of RT #1 [1, 276] RVT-GII Feature: gene Location: 1-276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-2 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VIYB01000034.1 (35443 bp)
Overview 1 RT 1: 24404-28007 bp Neighborhood of RT #1 [24404, 28132] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 24404-24661 bp Feature: gene Location: 24692-24967 bp Feature: gene Location: 25541-27208 bp Feature: domain Description: RVT_N Location: 25589-25826 bp Feature: domain Description: RVT_N Location: 25589-25826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25877-26519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25877-26519 bp Feature: domain Description: GIIM Note: maturase Location: 26570-26804 bp Feature: domain Description: GIIM Note: maturase Location: 26570-26804 bp Feature: domain Description: HNHc Note: nucleases Location: 27014-27173 bp Feature: domain Description: HNHc Note: nucleases Location: 27014-27173 bp Feature: gene Location: 27522-27713 bp Feature: gene Location: 27710-28132 bp Feature: domain Description: DUF1380 Location: 27713-28007 bp Feature: domain Description: DUF13 80 Location: 27713 -28007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: VIYB01000308.1 (323 bp)
Overview 1 RT 1: 1-235 bp Neighborhood of RT #1 [1, 321] RVT-CRISPR-like Feature: gene Location: 1-321 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4-235 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4 -235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VIYB01000142.1 (515 bp)
Overview 1 RT 1: 2-461 bp Neighborhood of RT #1 [2, 514] RVT-CRISPR-like Feature: gene Location: 2-514 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 59-461 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5 9-461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VIYB01000074.1 (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VIYB01000048.1 (15557 bp)
Overview 1 RT 1: 1825-6837 bp Neighborhood of RT #1 [1825, 6837] HTH_28 rve RVT-GII Feature: gene Location: 1825-2457 bp Feature: gene Location: 2486-3889 bp Feature: domain Description: HTH_28 Location: 2534-2675 bp Feature: domain Description: HTH_28 Location: 2534-267 5 bp Feature: domain Description: rve Location: 2915-3281 bp Feature: domain Description: rve Location: 2915-3281 bp Feature: gene Location: 4082-5569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4487-5177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4487 -517 7 bp Feature: gene Location: 5504-6319 bp Feature: gene Location: 6328-6837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), rve (pfam00665), RVT-GII

Seq: VIYB01000183.1 (413 bp)
Overview 1 RT 1: 2-398 bp Neighborhood of RT #1 [2, 412] RVT-UNC Feature: gene Location: 2-412 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 71-398 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 71-398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: VIYB01000511.1 (278 bp)
Overview 1 RT 1: 2-137 bp Neighborhood of RT #1 [2, 277] RVT-UG1 Feature: gene Location: 2-277 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 56-137 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 56-137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1