myRT

myRT report for GCA_007121535.1_ASM712153v1

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Seq: SKKK01000555.1 (5243 bp)
Overview 1 RT 1: 3942-5153 bp Neighborhood of RT #1 [3942, 5242] DUF5372 RVT-GII GIIM Feature: gene Location: 3942-4196 bp Feature: gene Location: 4200-4403 bp Feature: domain Description: DUF5372 Location: 4206-4371 bp Feature: domain Description: DUF5372 Location: 4206-4371 bp Feature: gene Location: 4520-5242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4526-4883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4526-4883 bp Feature: domain Description: GIIM Note: maturase Location: 4934-5153 bp Feature: domain Description: GIIM Note: maturase Location: 4934-51 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), RVT-GII, GIIM (pfam08388)

Seq: SKKK01000096.1 (16383 bp)
Overview 1 RT 1: 6539-13169 bp Neighborhood of RT #1 [6539, 13285] N6_Mtase RVT-UG4 MviM Feature: gene Location: 6539-9577 bp Feature: domain Description: N6_Mtase Location: 7463-8375 bp Feature: domain Description: N6_Mtase Location: 7463-8375 bp Feature: gene Location: 9757-10239 bp Feature: gene Location: 10379-10999 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 10388-10733 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 10388-10733 bp Feature: gene Location: 11300-11716 bp Feature: gene Location: 12029-13285 bp Feature: domain Description: MviM Location: 12137-13169 bp Feature: domain Description: MviM Location: 12 137-13169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), RVT-UG4, MviM (COG0673)

Seq: SKKK01000047.1 (75558 bp)
Overview 1 RT 1: 56033-60686 bp Neighborhood of RT #1 [56033, 60686] seleno_YedE Uma2 RVT-GII GIIM Feature: gene Location: 56033-57139 bp Feature: domain Description: seleno_YedE Location: 56078-57110 bp Feature: domain Description: seleno_YedE Location: 56078-57110 bp Feature: gene Location: 57293-57856 bp Feature: domain Description: Uma2 Location: 57326-57842 bp Feature: domain Description: Uma2 Location: 573 26-57842 bp Feature: gene Location: 58525-59937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58867-59482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58867-59482 bp Feature: domain Description: GIIM Note: maturase Location: 59533-59752 bp Feature: domain Description: GIIM Note: maturase Location: 5953 3 -59752 bp Feature: gene Location: 60040-60513 bp Feature: gene Location: 60540-60686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT seleno_YedE (TIGR04112), Uma2 (pfam05685), RVT-GII, GIIM (pfam08388)

Seq: SKKK01000289.1 (42477 bp)
Overview 1 RT 1: 15692-21928 bp Neighborhood of RT #1 [15692, 21939] RVT-GII AbgT PTS_EIIA_2 Feature: gene Location: 15692-17605 bp Feature: gene Location: 17611-18828 bp Feature: gene Location: 18825-19595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19143-19587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914 3-19587 bp Feature: gene Location: 19612-21204 bp Feature: domain Description: AbgT Location: 19681-21181 bp Feature: domain Description: AbgT Location: 19681-21181 bp Feature: gene Location: 21487-21939 bp Feature: domain Description: PTS_EIIA_2 Location: 21505-21928 bp Feature: domain Description: PTS_EIIA_2 Location: 21505-21928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AbgT (COG2978), PTS_EIIA_2 (pfam00359)

Seq: SKKK01000280.1 (10303 bp)
Overview 1 RT 1: 2-2644 bp Neighborhood of RT #1 [2, 2644] RVT-GII Feature: gene Location: 2-211 bp Feature: gene Location: 1055-1384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058-1262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105 8-1262 bp Feature: gene Location: 1501-1752 bp Feature: gene Location: 2066-2644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII