myRT

myRT report for GCA_007197645.1_ASM719764v1

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Seq: VKGK01000074.1 (2117 bp)
Overview 1 RT 1: 533-1781 bp Neighborhood of RT #1 [533, 2005] RVT_N RVT-GII GIIM Feature: gene Location: 533-2005 bp Ori: TRY09673.1 Gene: ltrA Feature: domain Description: RVT_N Location: 581-824 bp Feature: domain Description: RVT_N Location: 581 -824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 869-1496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 869-1 496 bp Feature: domain Description: GIIM Note: maturase Location: 1553-1781 bp Feature: domain Description: GIIM Note: maturase Location: 1 553-1 781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VKGK01000009.1 (184909 bp)
Overview 1 RT 1: 116199-119987 bp Neighborhood of RT #1 [116199, 119992] HTH_3 RVT-Retrons PRK01103 Feature: gene Location: 116199-116450 bp Feature: gene Location: 116473-116757 bp Ori: TRY14627.1 Feature: domain Description: HTH_3 Location: 116494-116650 bp Feature: domain Description: HTH_3 Location: 116494-116650 bp Feature: gene Location: 116741-117706 bp Ori: TRY14628.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116882-117446 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116882 -117446 bp Feature: gene Location: 118675-119175 bp Feature: gene Location: 119177-119992 bp Ori: TRY14630.1 Gene: mutM Feature: domain Description: PRK01103 Location: 119180-119987 bp Feature: domain Description: PRK01103 Location: 119180-119987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_3 (pfam01381), RVT-Retrons, PRK01103 (bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase)

Seq: VKGK01000068.1 (3094 bp)
Overview 1 RT 1: 437-2832 bp Neighborhood of RT #1 [437, 2832] RVT-UG7 Feature: gene Location: 437-2074 bp Ori: TRY09723.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 872-1271 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 872-1271 bp Feature: gene Location: 2071-2832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: VKGK01000075.1 (1982 bp)
Overview 1 RT 1: 85-1237 bp Neighborhood of RT #1 [85, 1434] RVT-GII GIIM Feature: gene Location: 85-1434 bp Ori: TRY09671.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367-985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367-985 bp Feature: domain Description: GIIM Note: maturase Location: 1033-1237 bp Feature: domain Description: GIIM Note: maturase Location: 1033-1237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)