myRT

myRT report for GCA_007273515.1_ASM727351v1

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Seq: PDXQ01000001.1 (3227200 bp)
Overview 1 RT 1: 270572-274399 bp 2 RT 2: 727927-731453 bp 3 RT 3: 1017960-1022774 bp 4 RT 4: 2027580-2034942 bp 5 RT 5: 2921370-2926387 bp Neighborhood of RT #1 [270572, 274794] DUF2922 HNH RVT-GII RVT-GII HipB Neighborhood of RT #2 [727927, 731453] HNH RVT-GII PDDEXK_2 Neighborhood of RT #3 [1017960, 1022905] DUF2922 HNH RVT-GII toxin_Txe_YoeB LysR Neighborhood of RT #4 [2027580, 2035457] DUF2922 group_II_RT_mat RVT-GII GIIM RVT-GII GT2_RfbC_Mx_like GT2_RfbC_Mx_like Neighborhood of RT #5 [2921370, 2926479] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Zeta_toxin Feature: gene Location: 270572-270784 bp Feature: domain Description: DUF2922 Location: 270593-270773 bp Feature: domain Description: DUF2922 Location: 270593-270773 bp Feature: gene Location: 271100-271660 bp Feature: domain Description: HNH Note: nucleases Location: 271457-271526 bp Feature: domain Description: HNH Note: nucleases Location: 271 457-271 526 bp Feature: gene Location: 271834-272088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271837-272014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271 837-27201 4 bp Feature: gene Location: 272094-272690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272175-272628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2721 75-272628 bp Feature: gene Location: 272720-272869 bp Feature: gene Location: 274138-274794 bp Feature: domain Description: HipB Location: 274147-274399 bp Feature: domain Description: HipB Location: 2741 47-274399 bp Feature: gene Location: 727927-728064 bp Feature: gene Location: 728220-728780 bp Feature: domain Description: HNH Note: nucleases Location: 728577-728646 bp Feature: domain Description: HNH Note: nucleases Location: 728577-728646 bp Feature: gene Location: 728954-729991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 729215-729917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72921 5-72991 7 bp Feature: gene Location: 731119-731286 bp Feature: domain Description: PDDEXK_2 Location: 731137-731272 bp Feature: domain Description: PDDEXK_2 Location: 731 1 37-731 272 bp Feature: gene Location: 731289-731453 bp Feature: gene Location: 1017960-1018172 bp Feature: domain Description: DUF2922 Location: 1017981-1018161 bp Feature: domain Description: DUF2922 Location: 1 01 7981 -1 01 81 61 bp Feature: gene Location: 1018487-1019047 bp Feature: domain Description: HNH Note: nucleases Location: 1018844-1018913 bp Feature: domain Description: HNH Note: nucleases Location: 1 01 8844-1 01 891 3 bp Feature: gene Location: 1019221-1020258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1019482-1020184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 9482-1 0201 84 bp Feature: gene Location: 1021304-1021465 bp Feature: domain Description: toxin_Txe_YoeB Location: 1021328-1021463 bp Feature: domain Description: toxin_Txe_YoeB Location: 1 021 328-1 021 463 bp Feature: gene Location: 1022066-1022905 bp Feature: domain Description: LysR Location: 1022069-1022774 bp Feature: domain Description: LysR Location: 1 022069-1 022774 bp Feature: gene Location: 2027580-2027792 bp Feature: domain Description: DUF2922 Location: 2027601-2027781 bp Feature: domain Description: DUF2922 Location: 2027601 -2027781 bp Feature: gene Location: 2028329-2028988 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2028335-2028626 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2028335-2028626 bp Feature: gene Location: 2029146-2030390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2029350-2030007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2029350-2030007 bp Feature: domain Description: GIIM Note: maturase Location: 2030088-2030304 bp Feature: domain Description: GIIM Note: maturase Location: 2030088-2030304 bp Feature: gene Location: 2030922-2031743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2031183-2031735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2031 1 83-2031 735 bp Feature: gene Location: 2032916-2033137 bp Feature: gene Location: 2033313-2035457 bp Feature: domain Description: GT2_RfbC_Mx_like Location: 2033853-2034462 bp Feature: domain Description: GT2_RfbC_Mx_like Location: 2033853-2034462 bp Feature: domain Description: GT2_RfbC_Mx_like Location: 2034630-2034942 bp Feature: domain Description: GT2_RfbC_Mx_like Location: 2034630-2034942 bp Feature: gene Location: 2921370-2921705 bp Feature: domain Description: RelB_DinJ Location: 2921574-2921697 bp Feature: domain Description: RelB_DinJ Location: 2921 574-2921 697 bp Feature: gene Location: 2921767-2922804 bp Feature: domain Description: FtsK_SpoIIIE Location: 2922439-2922685 bp Feature: domain Description: FtsK_SpoIIIE Location: 2922439-2922685 bp Feature: gene Location: 2923398-2925272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2923764-2924460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2923764-2924460 bp Feature: domain Description: HNHc Note: nucleases Location: 2925000-2925159 bp Feature: domain Description: HNHc Note: nucleases Location: 2925000-29251 59 bp Feature: gene Location: 2925374-2925727 bp Feature: domain Description: FtsK Location: 2925386-2925626 bp Feature: domain Description: FtsK Location: 2925386-2925626 bp Feature: gene Location: 2925805-2926479 bp Feature: domain Description: Zeta_toxin Location: 2925904-2926387 bp Feature: domain Description: Zeta_toxin Location: 2925904-2926387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2922 (pfam11148), HNH (pfam01844), RVT-GII, HipB (COG1396), PDDEXK_2 (pfam12784), toxin_Txe_YoeB (TIGR02116), LysR (COG0583), group_II_RT_mat (TIGR04416), GIIM (pfam08388), GT2_RfbC_Mx_like (cd04184)
RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), HNHc (smart00507), FtsK (COG1674), Zeta_toxin (pfam06414)

Seq: PDXQ01000002.1 (1283562 bp)
Overview 1 RT 1: 94674-105104 bp 2 RT 2: 183225-189483 bp 3 RT 3: 1135424-1141497 bp Neighborhood of RT #1 [94674, 105259] RVT-GII HNHc RVT-GII GIIM RVT-GII RVT-GII Peptidase_M23 NlpD TraC-F-type Neighborhood of RT #2 [183225, 189483] CelB TIGR00276 RVT-GII HNH Neighborhood of RT #3 [1135424, 1141497] FtsW RVT-GII GIIM RVT-GII GIIM group_II_RT_mat RVT-GII GrsT GrsT Feature: gene Location: 94674-94967 bp Feature: gene Location: 94971-95741 bp Feature: gene Location: 95930-96859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95936-96056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95936-96056 bp Feature: domain Description: HNHc Note: nucleases Location: 96602-96746 bp Feature: domain Description: HNHc Note: nucleases Location: 96602 -96746 bp Feature: gene Location: 96963-97472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96969-97089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96969-97089 bp Feature: domain Description: GIIM Note: maturase Location: 97170-97386 bp Feature: domain Description: GIIM Note: maturase Location: 97170-97386 bp Feature: gene Location: 97499-98206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97703-98147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97703-98147 bp Feature: gene Location: 98738-99586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99032-99578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99032 -99578 bp Feature: gene Location: 100263-102920 bp Feature: domain Description: Peptidase_M23 Location: 101667-101862 bp Feature: domain Description: Peptidase_M2 3 Location: 101667-101862 bp Feature: domain Description: NlpD Location: 102525-102888 bp Feature: domain Description: NlpD Location: 102 52 5-102 888 bp Feature: gene Location: 102932-105259 bp Feature: domain Description: TraC-F-type Location: 103574-105104 bp Feature: domain Description: TraC-F-type Location: 103574-105104 bp Feature: gene Location: 183225-184520 bp Feature: domain Description: CelB Location: 183240-184500 bp Feature: domain Description: CelB Location: 1832 40-184500 bp Feature: gene Location: 184621-185763 bp Feature: domain Description: TIGR00276 Location: 184645-185650 bp Feature: domain Description: TIGR002 76 Location: 184645-185650 bp Feature: gene Location: 187419-188456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187680-188382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187680-188382 bp Feature: gene Location: 188630-189190 bp Feature: domain Description: HNH Note: nucleases Location: 188987-189056 bp Feature: domain Description: HNH Note: nucleases Location: 188987-189056 bp Feature: gene Location: 189346-189483 bp Feature: gene Location: 1135424-1136572 bp Feature: domain Description: FtsW Location: 1135433-1136549 bp Feature: domain Description: FtsW Location: 1135433-1136549 bp Feature: gene Location: 1136598-1136894 bp Feature: gene Location: 1137071-1137625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1137083-1137173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1137083-1137173 bp Feature: domain Description: GIIM Note: maturase Location: 1137230-1137446 bp Feature: domain Description: GIIM Note: maturase Location: 11372 30-1137446 bp Feature: gene Location: 1137744-1138721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1137750-1138338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1137750-1138338 bp Feature: domain Description: GIIM Note: maturase Location: 1138419-1138635 bp Feature: domain Description: GIIM Note: maturase Location: 1138419-1138635 bp Feature: gene Location: 1138763-1138987 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1138796-1138976 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1138796-1138976 bp Feature: gene Location: 1139519-1140322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1139840-1140314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1139840-1140314 bp Feature: gene Location: 1140802-1141260 bp Feature: domain Description: GrsT Location: 1140814-1140877 bp Feature: domain Description: GrsT Location: 1140814-1140877 bp Feature: domain Description: GrsT Location: 1140949-1141240 bp Feature: domain Description: GrsT Location: 1140949-11412 40 bp Feature: gene Location: 1141354-1141497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), GIIM (pfam08388), Peptidase_M23 (pfam01551), NlpD (COG0739), TraC-F-type (TIGR02746), CelB (COG1455), TIGR00276 (epoxyqueuosine reductase), HNH (pfam01844), FtsW (COG0772)
group_II_RT_mat (TIGR04416), GrsT (COG3208)