myRT

myRT report for GCA_007556675.1_ASM755667v1

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Seq: VJOM01000006.1 (107446 bp)
Overview 1 RT 1: 104241-107320 bp Neighborhood of RT #1 [104241, 107349] Avd_like RVT-DGRs Feature: gene Location: 104241-106235 bp Feature: gene Location: 106247-106663 bp Feature: domain Description: Avd_like Location: 106334-106631 bp Feature: domain Description: Avd_like Location: 1 06334-1 06631 bp Feature: gene Location: 106660-107349 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 107089-107320 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 07089-1 07320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: VJOM01000004.1 (134848 bp)
Overview 1 RT 1: 133136-134847 bp Neighborhood of RT #1 [133136, 134847] DUF4376 RVT-DGRs Feature: gene Location: 133136-133405 bp Feature: gene Location: 133402-133968 bp Feature: domain Description: DUF4376 Location: 133663-133963 bp Feature: domain Description: DUF4376 Location: 133663-133963 bp Feature: gene Location: 133962-134528 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 133971-134316 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 133971-134316 bp Feature: gene Location: 134578-134847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4376 (pfam14301), RVT-DGRs

Seq: VJOM01000033.1 (24695 bp)
Overview 1 RT 1: 18558-24557 bp Neighborhood of RT #1 [18558, 24583] UPF0149 SEC-C AAA_32 Lon_C RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 18558-19400 bp Feature: domain Description: UPF0149 Location: 18642-19269 bp Feature: domain Description: UPF0149 Location: 18642-19269 bp Feature: domain Description: SEC-C Location: 19341-19392 bp Feature: domain Description: SEC-C Location: 193 41-193 92 bp Feature: gene Location: 19588-22101 bp Feature: domain Description: AAA_32 Location: 19750-21280 bp Feature: domain Description: AAA_3 2 Location: 19750-21280 bp Feature: domain Description: Lon_C Location: 21610-21868 bp Feature: domain Description: Lon_C Location: 21610-21868 bp Feature: gene Location: 22132-24303 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 22342-22954 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 223 42-22954 bp Feature: domain Description: Cas1_I-II-III Location: 23305-24262 bp Feature: domain Description: Cas1_I-II-III Location: 23 3 05-24262 bp Feature: gene Location: 24317-24583 bp Feature: domain Description: Cas2_I_II_III Location: 24329-24557 bp Feature: domain Description: Cas2_I_II_III Location: 243 29-24557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0149 (pfam03695), SEC-C (pfam02810), AAA_32 (pfam13654), Lon_C (pfam05362), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)