myRT

myRT report for GCA_007558965.1_ASM755896v1

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Seq: VLTE01000072.1 (14594 bp)
Overview 1 RT 1: 3219-14592 bp Neighborhood of RT #1 [3219, 14592] HELICc RVT-GII HNHc DEXDc MTS RVT-GII HNHc Feature: gene Location: 3219-3932 bp Feature: gene Location: 3949-5631 bp Feature: domain Description: HELICc Location: 4615-5014 bp Feature: domain Description: HELICc Location: 461 5-501 4 bp Feature: gene Location: 5692-7491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5995-6697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5995-6697 bp Feature: domain Description: HNHc Note: nucleases Location: 7222-7372 bp Feature: domain Description: HNHc Note: nucleases Location: 7222-7372 bp Feature: gene Location: 8192-9871 bp Feature: domain Description: DEXDc Location: 8972-9845 bp Feature: domain Description: DEXDc Location: 8972-9845 bp Feature: gene Location: 9943-10170 bp Feature: gene Location: 10186-11307 bp Feature: domain Description: MTS Location: 10282-10645 bp Feature: domain Description: MTS Location: 1 0282-1 0645 bp Feature: gene Location: 11452-13380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11773-12508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 773-1 2508 bp Feature: domain Description: HNHc Note: nucleases Location: 13099-13264 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3099-1 3264 bp Feature: gene Location: 14263-14406 bp Feature: gene Location: 14422-14592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VLTE01000081.1 (3686 bp)
Overview 1 RT 1: 3-3582 bp Neighborhood of RT #1 [3, 3605] HEPN RVT-GII NT_KNTase_like Feature: gene Location: 3-368 bp Feature: domain Description: HEPN Location: 57-339 bp Feature: domain Description: HEPN Location: 57-339 bp Feature: gene Location: 514-2445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835-1570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835-1570 bp Feature: gene Location: 2544-2930 bp Feature: gene Location: 3204-3605 bp Feature: domain Description: NT_KNTase_like Location: 3279-3582 bp Feature: domain Description: NT_KNTase_like Location: 32 79-3582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VLTE01000020.1 (52628 bp)
Overview 1 RT 1: 3-6795 bp Neighborhood of RT #1 [3, 6872] TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 3-2063 bp Feature: gene Location: 2094-3062 bp Feature: domain Description: TraC-F-type Location: 2121-2901 bp Feature: domain Description: TraC-F-type Location: 2121-2901 bp Feature: gene Location: 3353-5185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3653-4358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 653 -43 58 bp Feature: domain Description: HNHc Note: nucleases Location: 4937-5069 bp Feature: domain Description: HNHc Note: nucleases Location: 493 7-5069 bp Feature: gene Location: 5578-5754 bp Feature: gene Location: 5901-6872 bp Feature: domain Description: TraC-F-type Location: 6321-6795 bp Feature: domain Description: TraC-F-type Location: 63 21-6795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VLTE01000047.1 (2373 bp)
Overview 1 RT 1: 109-2006 bp Neighborhood of RT #1 [109, 2006] RVT_N RVT-GII GIIM Feature: gene Location: 109-1755 bp Feature: domain Description: RVT_N Location: 151-388 bp Feature: domain Description: RVT_N Location: 151-388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 2-1102 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1402 bp Feature: domain Description: GIIM Note: maturase Location: 1171-14 02 bp Feature: gene Location: 1803-2006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VLTE01000075.1 (9777 bp)
Overview 1 RT 1: 2561-7370 bp Neighborhood of RT #1 [2561, 7375] beta_clamp RVT-GII COG4712 Feature: gene Location: 2561-3673 bp Feature: domain Description: beta_clamp Location: 2564-3668 bp Feature: domain Description: beta_clamp Location: 25 64-3668 bp Feature: gene Location: 3754-4281 bp Feature: gene Location: 4359-6260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4677-5379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4677-5 379 bp Feature: gene Location: 6402-6590 bp Feature: gene Location: 7019-7375 bp Feature: domain Description: COG4712 Location: 7028-7370 bp Feature: domain Description: COG4712 Location: 7028-7370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VLTE01000023.1 (78768 bp)
Overview 1 RT 1: 35288-39541 bp Neighborhood of RT #1 [35288, 40188] TnpB_IS66 RVT-GII XerC Feature: gene Location: 35288-35665 bp Feature: domain Description: TnpB_IS66 Location: 35315-35630 bp Feature: domain Description: TnpB_IS6 6 Location: 35315-356 30 bp Feature: gene Location: 35662-35982 bp Feature: gene Location: 36181-36867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36184-36775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36 184-36 775 bp Feature: gene Location: 36926-37741 bp Feature: gene Location: 37738-40188 bp Feature: domain Description: XerC Location: 38911-39541 bp Feature: domain Description: XerC Location: 38911-39541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT