myRT

myRT report for GCA_007636495.1_ASM763649v1

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Seq: LVDS01000093.1 (2086 bp)
Overview 1 RT 1: 146-920 bp Neighborhood of RT #1 [146, 1711] RVT-UG12 Feature: gene Location: 146-1711 bp Ori: TVP00482.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 473-920 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 473-920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12

Seq: LVDS01000007.1 (124820 bp)
Overview 1 RT 1: 115715-124118 bp Neighborhood of RT #1 [115715, 124135] COG0610 RVT-UG15 RMtype1_S_EcoEI-TRD1-CR1_like RMtype1_S_EcoEI-TRD1-CR1_like HsdM Feature: gene Location: 115715-115924 bp Feature: gene Location: 116075-119410 bp Ori: TVP07621.1 Feature: domain Description: COG0610 Location: 116573-119075 bp Feature: domain Description: COG0610 Location: 116573-119075 bp Feature: gene Location: 119468-121084 bp Ori: TVP07633.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 119885-120287 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 119885-12 02 87 bp Feature: gene Location: 121099-122526 bp Ori: TVP07622.1 Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 121405-121681 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 12 1405-12 1681 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 121987-122473 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 12 1987-12 2 473 bp Feature: gene Location: 122516-124135 bp Ori: TVP07623.1 Feature: domain Description: HsdM Location: 122567-124118 bp Feature: domain Description: HsdM Location: 12 2 567-12 4118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG15, RMtype1_S_EcoEI-TRD1-CR1_like (cd17260), HsdM (COG0286)

Seq: LVDS01000040.1 (43748 bp)
Overview 1 RT 1: 30644-38083 bp Neighborhood of RT #1 [30644, 38085] LpoA PRK14994 RVT-Retrons HTH_XRE OM_YaeT Feature: gene Location: 30644-32473 bp Ori: TVP04443.1 Feature: domain Description: LpoA Location: 30668-32468 bp Feature: domain Description: LpoA Location: 3 0668-3 2468 bp Feature: gene Location: 32562-33404 bp Ori: TVP04444.1 Feature: domain Description: PRK14994 Location: 32580-33393 bp Feature: domain Description: PRK14994 Location: 3 2580-3 3 3 93 bp Feature: gene Location: 34383-35342 bp Ori: TVP04445.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34563-35109 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 4563 -3 5109 bp Feature: gene Location: 35329-35628 bp Ori: TVP04446.1 Feature: domain Description: HTH_XRE Location: 35344-35506 bp Feature: domain Description: HTH_XRE Location: 3 53 44-3 5506 bp Feature: gene Location: 36493-38085 bp Ori: TVP04452.1 Feature: domain Description: OM_YaeT Location: 36667-38083 bp Feature: domain Description: OM_YaeT Location: 3 6667-3 8083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LpoA (COG3107), PRK14994 (SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional), RVT-Retrons, HTH_XRE (smart00530), OM_YaeT (TIGR03303)