myRT

myRT report for GCA_007673755.1_ASM767375v1

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Seq: VEAG01000022.1 (33761 bp)
Overview 1 RT 1: 14154-16630 bp Neighborhood of RT #1 [14154, 16630] hlyII RVT-GII PDDEXK_2 Feature: gene Location: 14154-15116 bp Feature: domain Description: hlyII Location: 14235-15108 bp Feature: domain Description: hlyII Location: 1 4235-1 51 08 bp Feature: gene Location: 15387-15575 bp Feature: gene Location: 15658-15846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15715-15835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 571 5-1 5835 bp Feature: gene Location: 16081-16248 bp Feature: domain Description: PDDEXK_2 Location: 16087-16246 bp Feature: domain Description: PDDEXK_2 Location: 1 6087-1 6246 bp Feature: gene Location: 16463-16630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hlyII (TIGR01002), RVT-GII, PDDEXK_2 (pfam12784)

Seq: VEAG01000053.1 (2555 bp)
Overview 1 RT 1: 109-1900 bp Neighborhood of RT #1 [109, 1929] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 109-1929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-12 01 bp Feature: domain Description: Intron_maturas2 Location: 1339-1573 bp Feature: domain Description: Intron_maturas2 Location: 1339-1573 bp Feature: domain Description: HNHc Note: nucleases Location: 1753-1900 bp Feature: domain Description: HNHc Note: nucleases Location: 1753-1900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: VEAG01000023.1 (31130 bp)
Overview 1 RT 1: 24935-29124 bp Neighborhood of RT #1 [24935, 29124] RVT_N RVT-GII Feature: gene Location: 24935-25111 bp Feature: gene Location: 25443-25571 bp Feature: gene Location: 26705-27082 bp Feature: domain Description: RVT_N Location: 26711-26798 bp Feature: domain Description: RVT_N Location: 26711-26798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26852-27068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26852-27068 bp Feature: gene Location: 27882-28052 bp Feature: gene Location: 28102-29124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: VEAG01000028.1 (20976 bp)
Overview 1 RT 1: 7445-12231 bp Neighborhood of RT #1 [7445, 12233] RVT-GII GIIM HipB HipB AbrB Feature: gene Location: 7445-7594 bp Feature: gene Location: 8084-8359 bp Feature: gene Location: 8826-10064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8991-9606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8991-9606 bp Feature: domain Description: GIIM Note: maturase Location: 9666-9873 bp Feature: domain Description: GIIM Note: maturase Location: 9666-9873 bp Feature: gene Location: 10405-11205 bp Feature: domain Description: HipB Location: 10417-10585 bp Feature: domain Description: HipB Location: 104 17-10585 bp Feature: domain Description: HipB Location: 10624-10897 bp Feature: domain Description: HipB Location: 10624 -10897 bp Feature: gene Location: 12048-12233 bp Feature: domain Description: AbrB Location: 12108-12231 bp Feature: domain Description: AbrB Location: 12108-12231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HipB (COG1396), AbrB (pfam05145)

Seq: VEAG01000020.1 (42456 bp)
Overview 1 RT 1: 21996-34557 bp Neighborhood of RT #1 [21996, 34557] PinE RVT-GII GIIM HNHc PRK12467 SDR_e1 Feature: gene Location: 21996-22295 bp Feature: gene Location: 22336-22908 bp Feature: domain Description: PinE Location: 22342-22864 bp Feature: domain Description: PinE Location: 22342-22864 bp Feature: gene Location: 23026-24876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23335-24070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23335 -24070 bp Feature: domain Description: GIIM Note: maturase Location: 24139-24319 bp Feature: domain Description: GIIM Note: maturase Location: 24139-24319 bp Feature: domain Description: HNHc Note: nucleases Location: 24592-24760 bp Feature: domain Description: HNHc Note: nucleases Location: 245 92-24760 bp Feature: gene Location: 26044-33669 bp Feature: domain Description: PRK12467 Location: 26092-32425 bp Feature: domain Description: PRK12467 Location: 26092-32425 bp Feature: domain Description: SDR_e1 Location: 32536-33394 bp Feature: domain Description: SDR_e1 Location: 325 36-33394 bp Feature: gene Location: 34327-34557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK12467 (peptide synthase; Provisional), SDR_e1 (cd05235)