myRT

myRT report for GCA_007674145.1_ASM767414v1

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Seq: VEAZ01000015.1 (63539 bp)
Overview 1 RT 1: 2632-7229 bp Neighborhood of RT #1 [2632, 7229] HTH_MlrA-like_sg1 RVT_N RVT-GII GIIM Feature: gene Location: 2632-2814 bp Feature: domain Description: HTH_MlrA-like_sg1 Location: 2659-2794 bp Feature: domain Description: HTH_MlrA-like_sg1 Location: 2659-2794 bp Feature: gene Location: 2932-3081 bp Feature: gene Location: 4005-5690 bp Feature: domain Description: RVT_N Location: 4089-4335 bp Feature: domain Description: RVT_N Location: 4089-4335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4389-5049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4389-5049 bp Feature: domain Description: GIIM Note: maturase Location: 5118-5349 bp Feature: domain Description: GIIM Note: maturase Location: 51 1 8-5349 bp Feature: gene Location: 5949-6098 bp Feature: gene Location: 6618-7229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MlrA-like_sg1 (cd04764), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VEAZ01000013.1 (86929 bp)
Overview 1 RT 1: 5936-10394 bp 2 RT 2: 57155-63366 bp Neighborhood of RT #1 [5936, 10394] RVT-GII Intron_maturas2 HNHc DUF1738 Neighborhood of RT #2 [57155, 63401] RVT-UG17 RVT-UG8 XerC Feature: gene Location: 5936-6091 bp Feature: gene Location: 6183-6932 bp Feature: gene Location: 6958-8811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7222-8062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 2 2 -8062 bp Feature: domain Description: Intron_maturas2 Location: 8155-8482 bp Feature: domain Description: Intron_maturas2 Location: 8155-8482 bp Feature: domain Description: HNHc Note: nucleases Location: 8602-8758 bp Feature: domain Description: HNHc Note: nucleases Location: 8602 -8758 bp Feature: gene Location: 9428-10126 bp Feature: domain Description: DUF1738 Location: 9608-9785 bp Feature: domain Description: DUF1738 Location: 9608-9785 bp Feature: gene Location: 10119-10394 bp Feature: gene Location: 57155-57418 bp Feature: gene Location: 57393-57557 bp Feature: gene Location: 58166-59509 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 58367-58940 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 58367-58940 bp Feature: gene Location: 59759-61672 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 60236-60677 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 602 36-60677 bp Feature: gene Location: 61889-62182 bp Feature: gene Location: 62253-63401 bp Feature: domain Description: XerC Location: 62466-63366 bp Feature: domain Description: XerC Location: 62 466-63366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF1738 (pfam08401), RVT-UG17, RVT-UG8, XerC (COG4973)