myRT

myRT report for GCA_007676605.1_ASM767660v1

Download annotations/find similar RTs

Seq: VEKB01000005.1 (455534 bp)
Overview 1 RT 1: 172000-176466 bp Neighborhood of RT #1 [172000, 176466] cxxc_20_cxxc Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-UG17 SLATT_5 Feature: gene Location: 172000-172215 bp Feature: domain Description: cxxc_20_cxxc Location: 172009-172144 bp Feature: domain Description: cxxc_20_cxxc Location: 1 72009-1 721 44 bp Feature: gene Location: 172580-173692 bp Feature: domain Description: Arm-DNA-bind_4 Location: 172619-172754 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1 7261 9-1 72754 bp Feature: domain Description: Phage_int_SAM_3 Location: 172784-172946 bp Feature: domain Description: Phage_int_SAM_3 Location: 1 72784-1 72946 bp Feature: domain Description: INT_ICEBs1_C_like Location: 173108-173639 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 731 08-1 73639 bp Feature: gene Location: 173980-175350 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 174208-174793 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 74208-1 74793 bp Feature: gene Location: 175360-175947 bp Feature: domain Description: SLATT_5 Location: 175396-175927 bp Feature: domain Description: SLATT_5 Location: 1 75396-1 75927 bp Feature: gene Location: 176278-176466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cxxc_20_cxxc (TIGR04104), Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-UG17, SLATT_5 (pfam18160)

Seq: VEKB01000070.1 (2435 bp)
Overview 1 RT 1: 83-1865 bp Neighborhood of RT #1 [83, 1894] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 83-1894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1178 bp Feature: domain Description: Intron_maturas2 Location: 1256-1592 bp Feature: domain Description: Intron_maturas2 Location: 12 56-1592 bp Feature: domain Description: HNHc Note: nucleases Location: 1688-1865 bp Feature: domain Description: HNHc Note: nucleases Location: 1688-1865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)