myRT

myRT report for GCA_007676685.1_ASM767668v1

Download annotations/find similar RTs

Seq: VEJJ01000009.1 (201744 bp)
Overview 1 RT 1: 59228-63211 bp Neighborhood of RT #1 [59228, 63211] RE_TaqI RVT-CRISPR-like GIIM PRK00024 Feature: gene Location: 59228-59869 bp Feature: domain Description: RE_TaqI Location: 59411-59750 bp Feature: domain Description: RE_TaqI Location: 5941 1 -59750 bp Feature: gene Location: 59862-60416 bp Feature: gene Location: 60729-61991 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 61008-61608 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 61 008-61 608 bp Feature: domain Description: GIIM Note: maturase Location: 61716-61884 bp Feature: domain Description: GIIM Note: maturase Location: 61 71 6-61 884 bp Feature: gene Location: 62267-62872 bp Feature: domain Description: PRK00024 Location: 62339-62870 bp Feature: domain Description: PRK00024 Location: 62339-62870 bp Feature: gene Location: 62990-63211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RE_TaqI (pfam09573), RVT-CRISPR, GIIM (pfam08388), PRK00024 (DNA repair protein RadC)

Seq: VEJJ01000001.1 (827077 bp)
Overview 1 RT 1: 312261-315860 bp Neighborhood of RT #1 [312261, 315860] RVT-UG7 HNHc Feature: gene Location: 312261-312617 bp Feature: gene Location: 312640-312780 bp Feature: gene Location: 312837-314426 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 313215-313638 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3132 15-313638 bp Feature: gene Location: 314645-315229 bp Feature: domain Description: HNHc Note: nucleases Location: 314729-314921 bp Feature: domain Description: HNHc Note: nucleases Location: 31472 9-31492 1 bp Feature: gene Location: 315357-315860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, HNHc (smart00507)

Seq: VEJJ01000020.1 (80590 bp)
Overview 1 RT 1: 70792-79040 bp Neighborhood of RT #1 [70792, 79060] HK_WalK HK_WalK OmpR RVT-UG1 nitrilase AraC_binding AraC YcjR Feature: gene Location: 70792-72246 bp Feature: domain Description: HK_WalK Location: 71170-71521 bp Feature: domain Description: HK_WalK Location: 71170-71521 bp Feature: domain Description: HK_WalK Location: 71524-72241 bp Feature: domain Description: HK_WalK Location: 71524-72241 bp Feature: gene Location: 72267-72965 bp Feature: domain Description: OmpR Location: 72285-72960 bp Feature: domain Description: OmpR Location: 72285-72960 bp Feature: gene Location: 73195-77115 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 73852-74365 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 73 852-743 65 bp Feature: domain Description: nitrilase Location: 76438-77050 bp Feature: domain Description: nitrilase Location: 7643 8-77050 bp Feature: gene Location: 77227-78183 bp Feature: domain Description: AraC_binding Location: 77401-77755 bp Feature: domain Description: AraC_binding Location: 77401-77755 bp Feature: domain Description: AraC Location: 77848-78145 bp Feature: domain Description: AraC Location: 77848-78145 bp Feature: gene Location: 78284-79060 bp Feature: domain Description: YcjR Location: 78308-79040 bp Feature: domain Description: YcjR Location: 783 08-79040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HK_WalK (NF033092), OmpR (COG0745), RVT-UG1, nitrilase (cl11424), AraC_binding (pfam02311), AraC (COG2207), YcjR (COG1082)