myRT

myRT report for GCA_007679095.1_ASM767909v1

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Seq: VEFU01000105.1 (1868 bp)
Overview 1 RT 1: 94-1633 bp Neighborhood of RT #1 [94, 1788] RVT-GII GIIM Feature: gene Location: 94-231 bp Feature: gene Location: 523-1788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733-1348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733-1 348 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1633 bp Feature: domain Description: GIIM Note: maturase Location: 1 405-1 633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VEFU01000008.1 (100594 bp)
Overview 1 RT 1: 50487-55530 bp Neighborhood of RT #1 [50487, 55544] Maf RadC RVT-GII Intron_maturas2 HNHc PRK00024 PRK13927 Feature: gene Location: 50487-51098 bp Feature: domain Description: Maf Location: 50538-51087 bp Feature: domain Description: Maf Location: 50538-51087 bp Feature: gene Location: 51121-51693 bp Feature: domain Description: RadC Location: 51148-51673 bp Feature: domain Description: RadC Location: 51148-51673 bp Feature: gene Location: 52244-54127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52508-53348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 508-53348 bp Feature: domain Description: Intron_maturas2 Location: 53456-53711 bp Feature: domain Description: Intron_maturas2 Location: 53456-53711 bp Feature: domain Description: HNHc Note: nucleases Location: 53891-54071 bp Feature: domain Description: HNHc Note: nucleases Location: 53891-54071 bp Feature: gene Location: 54027-54347 bp Feature: domain Description: PRK00024 Location: 54210-54342 bp Feature: domain Description: PRK0002 4 Location: 542 10-54342 bp Feature: gene Location: 54525-55544 bp Feature: domain Description: PRK13927 Location: 54534-55530 bp Feature: domain Description: PRK1392 7 Location: 54534-55530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maf (pfam02545), RadC (pfam04002), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK00024 (DNA repair protein RadC), PRK13927 (rod shape-determining protein MreB; Provisional)

Seq: VEFU01000125.1 (788 bp)
Overview 1 RT 1: 3-714 bp Neighborhood of RT #1 [3, 785] RVT-GII Feature: gene Location: 3-785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VEFU01000049.1 (27663 bp)
Overview 1 RT 1: 7814-12903 bp Neighborhood of RT #1 [7814, 12908] YcgR HDGYP RVT-GII ManA NagC Feature: gene Location: 7814-8476 bp Feature: domain Description: YcgR Location: 7883-8468 bp Feature: domain Description: YcgR Location: 7883-84 68 bp Feature: gene Location: 8711-9745 bp Feature: domain Description: HDGYP Location: 8930-9680 bp Feature: domain Description: HDGYP Location: 8930-9680 bp Feature: gene Location: 10038-10424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10248-10416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1024 8-104 16 bp Feature: gene Location: 10954-11910 bp Feature: domain Description: ManA Location: 10972-11908 bp Feature: domain Description: ManA Location: 10972-11908 bp Feature: gene Location: 12018-12908 bp Feature: domain Description: NagC Location: 12030-12903 bp Feature: domain Description: NagC Location: 12030-12903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YcgR (pfam07317), HDGYP (COG2206), RVT-GII, ManA (COG1482), NagC (COG1940)

Seq: VEFU01000428.1 (244 bp)
Overview 1 RT 1: 3-240 bp Neighborhood of RT #1 [3, 242] RVT-GII Feature: gene Location: 3-242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159-240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 9-240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VEFU01000119.1 (935 bp)
Overview 1 RT 1: 3-900 bp Neighborhood of RT #1 [3, 932] RVT-GII Feature: gene Location: 3-932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII