myRT

myRT report for GCA_007679615.1_ASM767961v1

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Seq: VEGV01000186.1 (1542 bp)
Overview 1 RT 1: 66-1290 bp Neighborhood of RT #1 [66, 1466] RVT-GII GIIM Feature: gene Location: 66-1466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-1005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-1 005 bp Feature: domain Description: GIIM Note: maturase Location: 1065-1290 bp Feature: domain Description: GIIM Note: maturase Location: 1 065-1 290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VEGV01000043.1 (50030 bp)
Overview 1 RT 1: 28123-35830 bp Neighborhood of RT #1 [28123, 35830] PRK00142 COG2345 RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII RVT-GII GIIM Feature: gene Location: 28123-29016 bp Feature: domain Description: PRK00142 Location: 28138-28993 bp Feature: domain Description: PRK00142 Location: 2 8138-2 8993 bp Feature: gene Location: 29056-29700 bp Feature: domain Description: COG2345 Location: 29065-29683 bp Feature: domain Description: COG2 345 Location: 2 9065-2 9683 bp Feature: gene Location: 29772-30434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29775-29985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9775-2 9985 bp Feature: domain Description: GIIM Note: maturase Location: 30036-30243 bp Feature: domain Description: GIIM Note: maturase Location: 30036-302 43 bp Feature: gene Location: 30619-31254 bp Feature: gene Location: 31323-32885 bp Feature: domain Description: LZ_Tnp_IS66 Location: 31422-31632 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3142 2 -31632 bp Feature: domain Description: zf-IS66 Location: 31659-31788 bp Feature: domain Description: zf-IS66 Location: 31659-31788 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31851-32706 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31851-32 706 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 32727-32850 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 32 72 7-32 850 bp Feature: gene Location: 32973-33737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33324-33681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3332 4-33681 bp Feature: gene Location: 33882-35141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34113-34737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34113-34737 bp Feature: domain Description: GIIM Note: maturase Location: 34830-35043 bp Feature: domain Description: GIIM Note: maturase Location: 34830-35043 bp Feature: gene Location: 35472-35609 bp Feature: gene Location: 35636-35830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00142 (rhodanese-related sulfurtransferase), COG2345 (Predicted transcriptional regulator, ArsR family ), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: VEGV01000225.1 (702 bp)
Overview 1 RT 1: 1-451 bp Neighborhood of RT #1 [1, 618] RVT-GII GIIM Feature: gene Location: 1-618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-166 bp Feature: domain Description: GIIM Note: maturase Location: 223-451 bp Feature: domain Description: GIIM Note: maturase Location: 223 -451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VEGV01000214.1 (917 bp)
Overview 1 RT 1: 3-912 bp Neighborhood of RT #1 [3, 914] RVT-GII Feature: gene Location: 3-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VEGV01000021.1 (80923 bp)
Overview 1 RT 1: 1805-6119 bp Neighborhood of RT #1 [1805, 6119] rplS RVT-GII GIIM Feature: gene Location: 1805-2149 bp Feature: domain Description: rplS Location: 1808-2144 bp Feature: domain Description: rplS Location: 1808-2144 bp Feature: gene Location: 2203-2340 bp Feature: gene Location: 2411-3943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2894-3512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2894-35 12 bp Feature: domain Description: GIIM Note: maturase Location: 3563-3776 bp Feature: domain Description: GIIM Note: maturase Location: 35 63-3776 bp Feature: gene Location: 4081-4464 bp Feature: gene Location: 4482-6119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplS (PRK05338), RVT-GII, GIIM (pfam08388)

Seq: VEGV01000057.1 (36868 bp)
Overview 1 RT 1: 3934-8818 bp Neighborhood of RT #1 [3934, 8982] MFS_MefA_like PRK06474 RVT-GII GIIM bacill_yteA PRK14127 Feature: gene Location: 3934-5211 bp Feature: domain Description: MFS_MefA_like Location: 3997-5188 bp Feature: domain Description: MFS_MefA_like Location: 3997-5188 bp Feature: gene Location: 5223-5855 bp Feature: domain Description: PRK06474 Location: 5334-5817 bp Feature: domain Description: PRK06 474 Location: 5334-5817 bp Feature: gene Location: 5944-7245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6196-6814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 196 -6 814 bp Feature: domain Description: GIIM Note: maturase Location: 6865-7084 bp Feature: domain Description: GIIM Note: maturase Location: 6 86 5-7084 bp Feature: gene Location: 7826-8380 bp Feature: domain Description: bacill_yteA Location: 7847-8321 bp Feature: domain Description: bacill_yteA Location: 7847-8321 bp Feature: gene Location: 8605-8982 bp Feature: domain Description: PRK14127 Location: 8668-8818 bp Feature: domain Description: PRK14127 Location: 86 6 8-8818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MefA_like (cd06173), PRK06474 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388), bacill_yteA (TIGR02890), PRK14127 (cell division regulator GpsB)