myRT

myRT report for GCA_007681195.1_ASM768119v1

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Seq: VEKM01000018.1 Bacillus mobilis strain DE0306 NODE_18_length_78700_cov_27.075473, whole genome shotgun sequence (78700 bp)
Overview 1 RT 1: 35255-39508 bp Neighborhood of RT #1 [35255, 40155] TnpB_IS66 RVT-GII XerC Feature: gene Location: 35255-35632 bp Feature: domain Description: TnpB_IS66 Location: 35282-35597 bp Feature: domain Description: TnpB_IS66 Location: 35282-35597 bp Feature: gene Location: 35629-35949 bp Feature: gene Location: 36148-36834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36151-36742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361 51 -36742 bp Feature: gene Location: 36893-37708 bp Feature: gene Location: 37705-40155 bp Feature: domain Description: XerC Location: 38878-39508 bp Feature: domain Description: XerC Location: 38878-39508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, XerC (COG4973)

Seq: VEKM01000026.1 Bacillus mobilis strain DE0306 NODE_26_length_60416_cov_64.200056, whole genome shotgun sequence (60416 bp)
Overview 1 RT 1: 34486-44371 bp 2 RT 2: 48892-53701 bp Neighborhood of RT #1 [34486, 44371] PRK06850 HEPN RVT-GII NT_KNTase_like PRTRC_ThiF RVT-GII Intron_maturas2 HNHc E1_enzyme_family Neighborhood of RT #2 [48892, 53706] beta_clamp RVT-GII COG4712 Feature: gene Location: 34486-36258 bp Feature: domain Description: PRK06850 Location: 34501-35731 bp Feature: domain Description: PRK06850 Location: 34501-35731 bp Feature: gene Location: 36383-36826 bp Feature: domain Description: HEPN Location: 36437-36785 bp Feature: domain Description: HEPN Location: 36437-36785 bp Feature: gene Location: 36972-38903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37293-38028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372 93-3802 8 bp Feature: gene Location: 39662-40060 bp Feature: domain Description: NT_KNTase_like Location: 39737-40037 bp Feature: domain Description: NT_KNTase_like Location: 39737-40037 bp Feature: gene Location: 40082-40453 bp Feature: gene Location: 40473-41015 bp Feature: domain Description: PRTRC_ThiF Location: 40536-40995 bp Feature: domain Description: PRTRC_ThiF Location: 40536-40995 bp Feature: gene Location: 41267-43207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41597-42434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41597-42 434 bp Feature: domain Description: Intron_maturas2 Location: 42572-42878 bp Feature: domain Description: Intron_maturas2 Location: 42 572 -42 878 bp Feature: domain Description: HNHc Note: nucleases Location: 43001-43154 bp Feature: domain Description: HNHc Note: nucleases Location: 43001-43154 bp Feature: gene Location: 43776-43958 bp Feature: domain Description: E1_enzyme_family Location: 43824-43944 bp Feature: domain Description: E1_enzyme_family Location: 4382 4-43944 bp Feature: gene Location: 43961-44371 bp Feature: gene Location: 48892-50004 bp Feature: domain Description: beta_clamp Location: 48895-49999 bp Feature: domain Description: beta_clamp Location: 48895-49999 bp Feature: gene Location: 50085-50612 bp Feature: gene Location: 50690-52591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51008-51710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51008-51710 bp Feature: gene Location: 52786-52926 bp Feature: gene Location: 53350-53706 bp Feature: domain Description: COG4712 Location: 53359-53701 bp Feature: domain Description: COG4712 Location: 53359-53701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06850 (hypothetical protein; Provisional), HEPN (smart00748), RVT-GII, NT_KNTase_like (cd05403), PRTRC_ThiF (TIGR03736), Intron_maturas2 (pfam01348), HNHc (smart00507), E1_enzyme_family (cl22428), beta_clamp (cl29549), COG4712 (Uncharacterized protein )

Seq: VEKM01000034.1 Bacillus mobilis strain DE0306 NODE_34_length_52565_cov_61.254905, whole genome shotgun sequence (52565 bp)
Overview 1 RT 1: 16173-22337 bp Neighborhood of RT #1 [16173, 22393] DUF3854 RVT-GII HNHc LPD1 Feature: gene Location: 16173-16445 bp Feature: gene Location: 16472-17395 bp Feature: domain Description: DUF3854 Location: 17012-17366 bp Feature: domain Description: DUF3 854 Location: 17012-173 66 bp Feature: gene Location: 17479-19362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17800-18538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17800-1853 8 bp Feature: domain Description: HNHc Note: nucleases Location: 19096-19243 bp Feature: domain Description: HNHc Note: nucleases Location: 19096-19243 bp Feature: gene Location: 20098-20628 bp Feature: gene Location: 20618-22393 bp Feature: domain Description: LPD1 Location: 22142-22337 bp Feature: domain Description: LPD1 Location: 22142-223 3 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), RVT-GII, HNHc (smart00507), LPD1 (pfam18796)

Seq: VEKM01000040.1 Bacillus mobilis strain DE0306 NODE_40_length_45001_cov_62.017068, whole genome shotgun sequence (45001 bp)
Overview 1 RT 1: 34383-43837 bp Neighborhood of RT #1 [34383, 43837] RVT-GII GIIM HNH RVT-GII HNHc RVT_N RVT-GII DEXHc_Snf DEXHc_Snf Feature: gene Location: 34383-35096 bp Feature: gene Location: 35113-35691 bp Feature: gene Location: 35937-37136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35952-36333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35952-36333 bp Feature: domain Description: GIIM Note: maturase Location: 36396-36630 bp Feature: domain Description: GIIM Note: maturase Location: 36396-36630 bp Feature: domain Description: HNH Note: nucleases Location: 36870-37005 bp Feature: domain Description: HNH Note: nucleases Location: 36870-37005 bp Feature: gene Location: 37262-39283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37745-38447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3774 5-384 4 7 bp Feature: domain Description: HNHc Note: nucleases Location: 38996-39143 bp Feature: domain Description: HNHc Note: nucleases Location: 38996-3914 3 bp Feature: gene Location: 39785-40381 bp Feature: RT Description: RVT_N Location: 39839-40085 bp Feature: RT Description: RVT_N Location: 39839-4 0085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40139-40373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 0139-4 0373 bp Feature: gene Location: 40953-43538 bp Feature: domain Description: DEXHc_Snf Location: 41739-42102 bp Feature: domain Description: DEXHc_Snf Location: 4 1739-4 2102 bp Feature: domain Description: DEXHc_Snf Location: 42468-42741 bp Feature: domain Description: DEXHc_Snf Location: 4 24 68-4 274 1 bp Feature: gene Location: 43610-43837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844), HNHc (smart00507), RVT_N (pfam13655), DEXHc_Snf (cd17919)

Seq: VEKM01000072.1 Bacillus mobilis strain DE0306 NODE_72_length_2472_cov_99.381071, whole genome shotgun sequence (2472 bp)
Overview 1 RT 1: 1028-2011 bp Neighborhood of RT #1 [1028, 2364] RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 1028-1159 bp Feature: gene Location: 766-2364 bp Feature: RT Description: RVT_N Location: 769-898 bp Feature: RT Description: RVT_N Location: 769-898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952-1159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 2-115 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1258-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125 8-1711 bp Feature: domain Description: GIIM Note: maturase Location: 1780-2011 bp Feature: domain Description: GIIM Note: maturase Location: 1780-2011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VEKM01000076.1 Bacillus mobilis strain DE0306 NODE_76_length_1784_cov_25.325392, whole genome shotgun sequence (1784 bp)
Overview 1 RT 1: 1-1759 bp Neighborhood of RT #1 [1, 1782] RVT-GII HNHc Feature: gene Location: 1-1782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-1003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26 8-1003 bp Feature: domain Description: HNHc Note: nucleases Location: 1594-1759 bp Feature: domain Description: HNHc Note: nucleases Location: 1594-1759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)