myRT

myRT report for GCA_007692545.1_ASM769254v1

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Seq: REBV01000319.1 (5279 bp)
Overview 1 RT 1: 1-5279 bp Neighborhood of RT #1 [1, 5279] ResIII SSL2 RVT-Retrons Trypsin_2 Feature: gene Location: 1-394 bp Feature: gene Location: 399-2996 bp Ori: TVP74843.1 Feature: domain Description: ResIII Location: 408-1086 bp Feature: domain Description: ResIII Location: 408-1 086 bp Feature: domain Description: SSL2 Location: 1521-1689 bp Feature: domain Description: SSL2 Location: 1 521 -1 689 bp Feature: gene Location: 3216-4889 bp Ori: TVP74844.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3342-3990 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3342-3990 bp Feature: domain Description: Trypsin_2 Location: 4365-4800 bp Feature: domain Description: Trypsin_2 Location: 4365-4800 bp Feature: gene Location: 5033-5279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ResIII (pfam04851), SSL2 (COG1061), RVT-Retrons, Trypsin_2 (pfam13365)

Seq: REBV01000214.1 (21267 bp)
Overview 1 RT 1: 1-3074 bp Neighborhood of RT #1 [1, 3118] RVT-GII UPF0236 Feature: gene Location: 1-1040 bp Ori: TVP77434.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 80-964 bp Feature: gene Location: 1773-2066 bp Feature: gene Location: 2087-3118 bp Ori: TVP77419.1 Feature: domain Description: UPF0236 Location: 2117-3074 bp Feature: domain Description: UPF02 36 Location: 2 117-3074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, UPF0236 (pfam06782)

Seq: REBV01000060.1 (4594 bp)
Overview 1 RT 1: 246-3314 bp Neighborhood of RT #1 [246, 3314] RVT-GII GIIM RDD Feature: gene Location: 246-1550 bp Ori: TVP81890.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489-1107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489-1107 bp Feature: domain Description: GIIM Note: maturase Location: 1152-1374 bp Feature: domain Description: GIIM Note: maturase Location: 1152-13 74 bp Feature: gene Location: 1607-2206 bp Ori: TVP81891.1 Feature: domain Description: RDD Location: 1655-2153 bp Feature: domain Description: RDD Location: 1655-2153 bp Feature: gene Location: 2904-3314 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RDD (pfam06271)