myRT

myRT report for GCA_007692755.1_ASM769275v1

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Seq: REBL01000169.1 (41203 bp)
Overview 1 RT 1: 24605-29087 bp Neighborhood of RT #1 [24605, 29087] LDH-like_MDH AlbA_2 TPR TPR RVT-Retrons COG5550 Feature: gene Location: 24605-25564 bp Ori: TVP60726.1 Gene: mdh Feature: domain Description: LDH-like_MDH Location: 24641-25535 bp Feature: domain Description: LDH-like_MDH Location: 24641 -25535 bp Feature: gene Location: 25594-26643 bp Ori: TVP60727.1 Feature: domain Description: AlbA_2 Location: 25645-26074 bp Feature: domain Description: AlbA_2 Location: 25645-26074 bp Feature: domain Description: TPR Location: 26101-26365 bp Feature: domain Description: TPR Location: 261 01 -26365 bp Feature: domain Description: TPR Location: 26386-26632 bp Feature: domain Description: TPR Location: 26386-26632 bp Feature: gene Location: 27190-28266 bp Ori: TVP60728.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27370-27976 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27370-27976 bp Feature: gene Location: 28411-28773 bp Ori: TVP60729.1 Feature: domain Description: COG5550 Location: 28414-28765 bp Feature: domain Description: COG5550 Location: 2841 4-28765 bp Feature: gene Location: 28770-29087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LDH-like_MDH (cd01339), AlbA_2 (pfam04326), TPR (smart00028), RVT-Retrons, COG5550 (Predicted aspartyl protease )

Seq: REBL01000187.1 (42867 bp)
Overview 1 RT 1: 27136-34050 bp Neighborhood of RT #1 [27136, 34073] P4Hc RVT-CRISPR-like COG0610 DUF45 Feature: gene Location: 27136-27996 bp Feature: gene Location: 28045-28575 bp Ori: TVP60096.1 Feature: domain Description: P4Hc Location: 28156-28543 bp Feature: domain Description: P4Hc Location: 2 8156-2 8543 bp Feature: gene Location: 28893-29753 bp Ori: TVP60097.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 29139-29730 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 9139-2 9730 bp Feature: gene Location: 30211-33378 bp Ori: TVP60098.1 Feature: domain Description: COG0610 Location: 30241-33055 bp Feature: domain Description: COG0610 Location: 302 41-33055 bp Feature: gene Location: 33375-34073 bp Ori: TVP60099.1 Feature: domain Description: DUF45 Location: 33435-34050 bp Feature: domain Description: DUF45 Location: 33435-34050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P4Hc (smart00702), RVT-CRISPR, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863)