myRT

myRT report for GCA_007695205.1_ASM769520v1

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Seq: REEF01000493.1 (15334 bp)
Overview 1 RT 1: 10443-15331 bp Neighborhood of RT #1 [10443, 15331] RfaL TPR RVT-CRISPR-like RNase_H_bacteria_like Feature: gene Location: 10443-12812 bp Feature: domain Description: RfaL Location: 11187-11781 bp Feature: domain Description: RfaL Location: 1 1 1 87-1 1 781 bp Feature: domain Description: TPR Location: 12249-12681 bp Feature: domain Description: TPR Location: 1 2249-1 2681 bp Feature: gene Location: 13190-13399 bp Feature: gene Location: 13446-14873 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 13515-14061 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 351 5-1 4061 bp Feature: domain Description: RNase_H_bacteria_like Location: 14484-14871 bp Feature: domain Description: RNase_H_bacteria_like Location: 1 4484-1 4871 bp Feature: gene Location: 14978-15331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RfaL (COG3307), TPR (smart00028), RVT-CRISPR, RNase_H_bacteria_like (cd13935)

Seq: REEF01000664.1 (9869 bp)
Overview 1 RT 1: 6582-9819 bp Neighborhood of RT #1 [6582, 9819] ARS_like RVT-GII Feature: gene Location: 6582-8039 bp Feature: domain Description: ARS_like Location: 6672-7938 bp Feature: domain Description: ARS_like Location: 6672 -7938 bp Feature: gene Location: 8262-8399 bp Feature: gene Location: 8711-9493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8873-9206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8873-92 06 bp Feature: gene Location: 9682-9819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ARS_like (cd16146), RVT-GII

Seq: REEF01000280.1 (9612 bp)
Overview 1 RT 1: 5418-9610 bp Neighborhood of RT #1 [5418, 9610] AbgT RVT-GII Feature: gene Location: 5418-7013 bp Feature: domain Description: AbgT Location: 5487-6990 bp Feature: domain Description: AbgT Location: 5487-6990 bp Feature: gene Location: 7043-7189 bp Feature: gene Location: 7236-8006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7554-7995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7554-7995 bp Feature: gene Location: 8311-9465 bp Feature: gene Location: 9446-9610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbgT (COG2978), RVT-GII

Seq: REEF01000975.1 (7434 bp)
Overview 1 RT 1: 2098-7083 bp Neighborhood of RT #1 [2098, 7088] rve_3 RVT-DGRs Hrd STKc_PknB_like YfmG Feature: gene Location: 2098-2355 bp Feature: domain Description: rve_3 Location: 2134-2293 bp Feature: domain Description: rve_3 Location: 2134 -2293 bp Feature: gene Location: 2446-2661 bp Feature: gene Location: 2818-3672 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2875-3469 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2875-34 69 bp Feature: gene Location: 3800-4330 bp Feature: domain Description: Hrd Location: 4088-4298 bp Feature: domain Description: Hrd Location: 4 088-4 298 bp Feature: gene Location: 4464-7088 bp Feature: domain Description: STKc_PknB_like Location: 4680-5469 bp Feature: domain Description: STKc_PknB_like Location: 4 680-54 69 bp Feature: domain Description: YfmG Location: 6126-7083 bp Feature: domain Description: YfmG Location: 6126-7083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), RVT-DGRs, Hrd (LOAD_Hrd), STKc_PknB_like (cd14014), YfmG (COG1262)

Seq: REEF01001102.1 (3746 bp)
Overview 1 RT 1: 874-3212 bp Neighborhood of RT #1 [874, 3574] RVT-GII Feature: gene Location: 874-1056 bp Feature: gene Location: 1075-1563 bp Feature: gene Location: 1811-3574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2522-3212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 22-3212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: REEF01000123.1 (3295 bp)
Overview 1 RT 1: 3-3283 bp Neighborhood of RT #1 [3, 3294] HTH_17 RVT-DGRs Avd_like YfmG Feature: gene Location: 3-530 bp Feature: gene Location: 527-895 bp Feature: domain Description: HTH_17 Location: 539-683 bp Feature: domain Description: HTH_17 Location: 539-6 83 bp Feature: gene Location: 944-2347 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1151-1793 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1151-1793 bp Feature: gene Location: 2344-2646 bp Feature: domain Description: Avd_like Location: 2350-2632 bp Feature: domain Description: Avd_like Location: 2350-26 32 bp Feature: gene Location: 2770-3294 bp Feature: domain Description: YfmG Location: 2791-3283 bp Feature: domain Description: YfmG Location: 2791-3283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-DGRs, Avd_like (cd16376), YfmG (COG1262)