myRT

myRT report for GCA_007714185.1_ASM771418v1

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Seq: VMQV01000239.1 (1768 bp)
Overview 1 RT 1: 2-1625 bp Neighborhood of RT #1 [2, 1765] RVT-GII DUF222 Feature: gene Location: 2-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326-866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326-866 bp Feature: gene Location: 1406-1765 bp Feature: domain Description: DUF222 Location: 1412-1625 bp Feature: domain Description: DUF222 Location: 1 41 2-1 625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF222 (pfam02720)

Seq: VMQV01000122.1 (14560 bp)
Overview 1 RT 1: 9399-14546 bp Neighborhood of RT #1 [9399, 14557] DEDD_Tnp_IS110 Transposase_20 RVT_N RVT-GII GIIM Transposase_mut Feature: gene Location: 9399-9722 bp Feature: gene Location: 10049-11293 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 10067-10538 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 10067-10538 bp Feature: domain Description: Transposase_20 Location: 10880-11132 bp Feature: domain Description: Transposase_2 0 Location: 10880-11132 bp Feature: gene Location: 11991-13793 bp Feature: domain Description: RVT_N Location: 12036-12273 bp Feature: domain Description: RVT_N Location: 12 036-12 2 73 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12333-12993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 333-12 993 bp Feature: domain Description: GIIM Note: maturase Location: 13062-13293 bp Feature: domain Description: GIIM Note: maturase Location: 13062 -132 93 bp Feature: gene Location: 13978-14136 bp Feature: gene Location: 14060-14557 bp Feature: domain Description: Transposase_mut Location: 14132-14546 bp Feature: domain Description: Transposase_mut Location: 14132 -14546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872)

Seq: VMQV01000290.1 (790 bp)
Overview 1 RT 1: 142-643 bp Neighborhood of RT #1 [142, 789] RVT-GII GIIM Feature: gene Location: 142-789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154-358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154-3 58 bp Feature: domain Description: GIIM Note: maturase Location: 430-643 bp Feature: domain Description: GIIM Note: maturase Location: 43 0-643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VMQV01000105.1 (17740 bp)
Overview 1 RT 1: 10999-14529 bp Neighborhood of RT #1 [10999, 14529] TetR_N TetR_C_35 rve RVT-GII GIIM Feature: gene Location: 10999-11628 bp Feature: domain Description: TetR_N Location: 11056-11188 bp Feature: domain Description: TetR_N Location: 11056-11188 bp Feature: domain Description: TetR_C_35 Location: 11257-11590 bp Feature: domain Description: TetR_C_35 Location: 11257-11590 bp Feature: gene Location: 11920-12201 bp Feature: domain Description: rve Location: 11926-12046 bp Feature: domain Description: rve Location: 11926-1204 6 bp Feature: gene Location: 12336-13784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12654-13341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12654 -1334 1 bp Feature: domain Description: GIIM Note: maturase Location: 13416-13611 bp Feature: domain Description: GIIM Note: maturase Location: 134 16-13611 bp Feature: gene Location: 13787-13945 bp Feature: gene Location: 14314-14529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), TetR_C_35 (pfam18556), rve (pfam00665), RVT-GII, GIIM (pfam08388)