myRT

myRT report for GCA_007714205.1_ASM771420v1

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Seq: VMQU01000323.1 (790 bp)
Overview 1 RT 1: 142-643 bp Neighborhood of RT #1 [142, 789] RVT-GII GIIM Feature: gene Location: 142-789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154-358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 54-358 bp Feature: domain Description: GIIM Note: maturase Location: 430-643 bp Feature: domain Description: GIIM Note: maturase Location: 430-643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VMQU01000129.1 (14715 bp)
Overview 1 RT 1: 9458-14710 bp Neighborhood of RT #1 [9458, 14712] DEDD_Tnp_IS110 Transposase_20 RVT_N RVT-GII GIIM Transposase_mut Feature: gene Location: 9458-9781 bp Feature: gene Location: 10108-11352 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 10126-10597 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 1012 6-10597 bp Feature: domain Description: Transposase_20 Location: 10939-11191 bp Feature: domain Description: Transposase_2 0 Location: 10939-11191 bp Feature: gene Location: 12050-13852 bp Feature: domain Description: RVT_N Location: 12095-12332 bp Feature: domain Description: RVT_N Location: 12 095-12 332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12392-13052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 392 -13052 bp Feature: domain Description: GIIM Note: maturase Location: 13121-13352 bp Feature: domain Description: GIIM Note: maturase Location: 1312 1-13352 bp Feature: gene Location: 14037-14195 bp Feature: gene Location: 14119-14712 bp Feature: domain Description: Transposase_mut Location: 14191-14710 bp Feature: domain Description: Transposase_mut Location: 14191-14710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872)

Seq: VMQU01000084.1 (24288 bp)
Overview 1 RT 1: 2-3068 bp Neighborhood of RT #1 [2, 3068] RVT-GII DUF222 Feature: gene Location: 2-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326-866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 26-866 bp Feature: gene Location: 1406-2566 bp Feature: domain Description: DUF222 Location: 1583-2426 bp Feature: domain Description: DUF222 Location: 1583 -2426 bp Feature: gene Location: 2916-3068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF222 (pfam02720)

Seq: VMQU01000112.1 (17740 bp)
Overview 1 RT 1: 3212-6704 bp Neighborhood of RT #1 [3212, 6742] RVT-GII GIIM rve TetR_N TetR_C_35 Feature: gene Location: 3212-3427 bp Feature: gene Location: 3796-3954 bp Feature: gene Location: 3957-5405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4275-4962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 275-4 962 bp Feature: domain Description: GIIM Note: maturase Location: 5037-5232 bp Feature: domain Description: GIIM Note: maturase Location: 5037-5232 bp Feature: gene Location: 5540-5821 bp Feature: domain Description: rve Location: 5546-5666 bp Feature: domain Description: rve Location: 554 6-5666 bp Feature: gene Location: 6113-6742 bp Feature: domain Description: TetR_N Location: 6170-6302 bp Feature: domain Description: TetR_N Location: 6170-6302 bp Feature: domain Description: TetR_C_35 Location: 6371-6704 bp Feature: domain Description: TetR_C_35 Location: 6371-6704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), rve (pfam00665), TetR_N (pfam00440), TetR_C_35 (pfam18556)