myRT

myRT report for GCA_007746295.1_ASM774629v1

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Seq: CP036341.1 (7530055 bp)
Overview 1 RT 1: 240132-250367 bp 2 RT 2: 1354772-1360955 bp 3 RT 3: 6636807-6639488 bp Neighborhood of RT #1 [240132, 250417] Tra5 RVT-GII GIIM ClpA AAA_2 DUF3880 Glyco_trans_1_2 Methyltransf_23 GT_2_like_c GT_2_like_c GT_2_like_c TPR TPR TPR TPR Neighborhood of RT #2 [1354772, 1360972] PRK07561 RVT-Retrons S2P-M50_SpoIVFB Neighborhood of RT #3 [6636807, 6639488] RVT-GII YTV YTV YTV YTV YTV YTV Feature: gene Location: 240132-240950 bp Feature: domain Description: Tra5 Location: 240162-240873 bp Feature: domain Description: Tra5 Location: 2401 62-240873 bp Feature: gene Location: 241071-241373 bp Feature: gene Location: 241529-242926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241865-242486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 865-242486 bp Feature: domain Description: GIIM Note: maturase Location: 242534-242759 bp Feature: domain Description: GIIM Note: maturase Location: 242534-242759 bp Feature: gene Location: 243004-244995 bp Feature: domain Description: ClpA Location: 243199-243850 bp Feature: domain Description: ClpA Location: 2431 99-243850 bp Feature: domain Description: AAA_2 Location: 244042-244552 bp Feature: domain Description: AAA_2 Location: 244042-244552 bp Feature: gene Location: 245009-250417 bp Feature: domain Description: DUF3880 Location: 245240-245444 bp Feature: domain Description: DUF3880 Location: 245240-245444 bp Feature: domain Description: Glyco_trans_1_2 Location: 245564-245837 bp Feature: domain Description: Glyco_trans_1 _2 Location: 245564-245837 bp Feature: domain Description: Methyltransf_23 Location: 245933-246401 bp Feature: domain Description: Methyltransf_23 Location: 245933-246401 bp Feature: domain Description: GT_2_like_c Location: 246584-247193 bp Feature: domain Description: GT_2_like_c Location: 246584-2471 93 bp Feature: domain Description: GT_2_like_c Location: 248003-248615 bp Feature: domain Description: GT_2_like_c Location: 248003-24861 5 bp Feature: domain Description: GT_2_like_c Location: 248831-249116 bp Feature: domain Description: GT_2_like_c Location: 248831 -2491 1 6 bp Feature: domain Description: TPR Location: 249413-249704 bp Feature: domain Description: TPR Location: 24941 3-249704 bp Feature: domain Description: TPR Location: 249764-250100 bp Feature: domain Description: TPR Location: 249764-2501 00 bp Feature: domain Description: TPR Location: 250166-250259 bp Feature: domain Description: TPR Location: 2501 66-250259 bp Feature: domain Description: TPR Location: 250268-250367 bp Feature: domain Description: TPR Location: 250268-250367 bp Feature: gene Location: 1354772-1357501 bp Feature: domain Description: PRK07561 Location: 1354793-1357418 bp Feature: domain Description: PRK07561 Location: 1 354793-1 35741 8 bp Feature: gene Location: 1357519-1358310 bp Feature: gene Location: 1358457-1359731 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1358889-1359507 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 358889-1 359507 bp Feature: gene Location: 1360071-1360202 bp Feature: gene Location: 1360277-1360972 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 1360346-1360955 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 1 360346-1 360955 bp Feature: gene Location: 6636807-6636974 bp Feature: gene Location: 6637020-6637172 bp Feature: gene Location: 6637380-6637739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6637419-6637704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663741 9-6637704 bp Feature: gene Location: 6637853-6639235 bp Feature: domain Description: YTV Location: 6637997-6638096 bp Feature: domain Description: YTV Location: 6637997-6638096 bp Feature: domain Description: YTV Location: 6638162-6638258 bp Feature: domain Description: YTV Location: 66381 62-6638258 bp Feature: domain Description: YTV Location: 6638261-6638384 bp Feature: domain Description: YTV Location: 6638261 -6638384 bp Feature: domain Description: YTV Location: 6638402-6638495 bp Feature: domain Description: YTV Location: 6638402-6638495 bp Feature: domain Description: YTV Location: 6638720-6638825 bp Feature: domain Description: YTV Location: 6638720-6638825 bp Feature: domain Description: YTV Location: 6638915-6638996 bp Feature: domain Description: YTV Location: 663891 5-6638996 bp Feature: gene Location: 6639252-6639488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ClpA (TIGR02639), AAA_2 (pfam07724), DUF3880 (pfam12996), Glyco_trans_1_2 (pfam13524), Methyltransf_23 (pfam13489), GT_2_like_c (cd04186), TPR (smart00028)
PRK07561 (DNA topoisomerase I subunit omega; Validated), RVT-Retrons, S2P-M50_SpoIVFB (cd06161), YTV (pfam07639)