myRT

myRT report for GCA_007748175.1_ASM774817v1

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Seq: CP037422.1 (7218541 bp)
Overview 1 RT 1: 3751997-3758218 bp 2 RT 2: 3788821-3797791 bp 3 RT 3: 4518207-4524025 bp 4 RT 4: 6667269-6673416 bp Neighborhood of RT #1 [3751997, 3758218] ANK Ank_4 ANK RVT-CRISPR-like RNase_H_bacteria_like Neighborhood of RT #2 [3788821, 3798477] COG0610 RVT-UG17 KOG0730 Peptidases_S8_Subtilisin_like_2 Neighborhood of RT #3 [4518207, 4524025] YcxB DDE_Tnp_1_6 RVT-UG4 COG5635 Neighborhood of RT #4 [6667269, 6673514] S2P-M50_SpoIVFB RVT-Retrons PRK07561 Feature: gene Location: 3751997-3753184 bp Feature: gene Location: 3753175-3754383 bp Feature: domain Description: ANK Location: 3753232-3753487 bp Feature: domain Description: ANK Location: 3753232-3753487 bp Feature: domain Description: Ank_4 Location: 3753703-3753877 bp Feature: domain Description: Ank_4 Location: 3753703-3753877 bp Feature: domain Description: ANK Location: 3753928-3754030 bp Feature: domain Description: ANK Location: 3753928-3754030 bp Feature: gene Location: 3754491-3756251 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3754881-3755487 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3754881 -3755487 bp Feature: domain Description: RNase_H_bacteria_like Location: 3755853-3756246 bp Feature: domain Description: RNase_H_bacteria_like Location: 3755853-3756246 bp Feature: gene Location: 3756285-3756764 bp Feature: gene Location: 3756761-3758218 bp Feature: gene Location: 3788821-3791760 bp Feature: domain Description: COG0610 Location: 3788842-3791752 bp Feature: domain Description: COG061 0 Location: 3788842-3791 752 bp Feature: gene Location: 3791760-3792668 bp Feature: gene Location: 3792665-3794401 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3793079-3793472 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3793079-3793472 bp Feature: gene Location: 3794867-3795865 bp Feature: domain Description: KOG0730 Location: 3795221-3795845 bp Feature: domain Description: KOG0730 Location: 3795221 -3795845 bp Feature: gene Location: 3795880-3798477 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 3796828-3797791 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 3796828-3797791 bp Feature: gene Location: 4518207-4518752 bp Feature: domain Description: YcxB Location: 4518534-4518708 bp Feature: domain Description: YcxB Location: 451 8534-451 8708 bp Feature: gene Location: 4518838-4519173 bp Feature: domain Description: DDE_Tnp_1_6 Location: 4518856-4519009 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 451 8856-451 9009 bp Feature: gene Location: 4519328-4520155 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4519427-4519877 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 451 9427-451 9877 bp Feature: gene Location: 4520247-4523438 bp Feature: domain Description: COG5635 Location: 4521681-4522782 bp Feature: domain Description: COG5635 Location: 4521 681 -4522782 bp Feature: gene Location: 4523618-4524025 bp Feature: gene Location: 6667269-6667967 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 6667350-6667950 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 6667350-6667950 bp Feature: gene Location: 6668094-6668324 bp Feature: gene Location: 6668520-6669812 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6668970-6669585 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6668970-6669585 bp Feature: gene Location: 6669988-6670755 bp Feature: gene Location: 6670770-6673514 bp Feature: domain Description: PRK07561 Location: 6670791-6673416 bp Feature: domain Description: PRK07561 Location: 6670791 -667341 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ANK (smart00248), Ank_4 (pfam13637), RVT-CRISPR, RNase_H_bacteria_like (cd13935), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG17, KOG0730 (KOG0730, AAA+-type ATPase ), Peptidases_S8_Subtilisin_like_2 (cd04847), YcxB (pfam14317), DDE_Tnp_1_6 (pfam13751)
RVT-UG4, COG5635 (Predicted NTPase, NACHT family domain ), S2P-M50_SpoIVFB (cd06161), RVT-Retrons, PRK07561 (DNA topoisomerase I subunit omega; Validated)