myRT

myRT report for GCA_007752535.1_ASM775253v1

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Seq: CP036431.1 (91178 bp)
Overview 1 RT 1: 27912-32385 bp 2 RT 2: 73499-77390 bp Neighborhood of RT #1 [27912, 32468] RVT-GII HTH_32 InsE Neighborhood of RT #2 [73499, 77390] pepcterm_polyde RVT-GII DDE_Tnp_1 Feature: gene Location: 27912-28568 bp Feature: gene Location: 28750-29313 bp Feature: gene Location: 29888-30367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30176-30314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 76-3031 4 bp Feature: gene Location: 30764-31504 bp Feature: domain Description: HTH_32 Location: 30947-31184 bp Feature: domain Description: HTH_32 Location: 30947-31 1 84 bp Feature: gene Location: 32106-32468 bp Feature: domain Description: InsE Location: 32166-32385 bp Feature: domain Description: InsE Location: 321 66-32385 bp Feature: gene Location: 73499-74458 bp Feature: domain Description: pepcterm_polyde Location: 73583-74390 bp Feature: domain Description: pepcterm_polyde Location: 73583-74390 bp Feature: gene Location: 74780-75082 bp Feature: gene Location: 75091-75555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75400-75538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75400-75538 bp Feature: gene Location: 76156-77112 bp Feature: domain Description: DDE_Tnp_1 Location: 76564-77029 bp Feature: domain Description: DDE_Tnp_1 Location: 76564-77029 bp Feature: gene Location: 77220-77390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_32 (pfam13565), InsE (COG2963), pepcterm_polyde (TIGR03006), DDE_Tnp_1 (pfam01609)

Seq: CP036428.1 (140537 bp)
Overview 1 RT 1: 53049-57462 bp Neighborhood of RT #1 [53049, 57494] DDE_3 HTH_Hin_like HTH_33 RVT-GII Intron_maturas2 HNHc ComA-like_MBL-fold DUF3006 HHH_3 DUF3006 Feature: gene Location: 53049-53606 bp Feature: domain Description: DDE_3 Location: 53094-53502 bp Feature: domain Description: DDE_3 Location: 53094-53502 bp Feature: gene Location: 53616-53990 bp Feature: domain Description: HTH_Hin_like Location: 53622-53691 bp Feature: domain Description: HTH_Hin_like Location: 5362 2 -53691 bp Feature: domain Description: HTH_33 Location: 53835-53985 bp Feature: domain Description: HTH_33 Location: 53835-53985 bp Feature: gene Location: 54306-56105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54567-55362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54567-55362 bp Feature: domain Description: Intron_maturas2 Location: 55485-55704 bp Feature: domain Description: Intron_maturas2 Location: 55485-55704 bp Feature: domain Description: HNHc Note: nucleases Location: 55905-56061 bp Feature: domain Description: HNHc Note: nucleases Location: 55905-56061 bp Feature: gene Location: 56554-56871 bp Feature: domain Description: ComA-like_MBL-fold Location: 56662-56833 bp Feature: domain Description: ComA-like_MBL-fold Location: 56662 -56833 bp Feature: gene Location: 56868-57494 bp Feature: domain Description: DUF3006 Location: 56892-57015 bp Feature: domain Description: DUF3006 Location: 56892 -57015 bp Feature: domain Description: HHH_3 Location: 57048-57219 bp Feature: domain Description: HHH_3 Location: 57048-572 19 bp Feature: domain Description: DUF3006 Location: 57306-57462 bp Feature: domain Description: DUF3006 Location: 57306-57462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), HTH_Hin_like (cd00569), HTH_33 (pfam13592), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), ComA-like_MBL-fold (cd07731), DUF3006 (pfam11213), HHH_3 (pfam12836)

Seq: CP036426.1 (8668938 bp)
Overview 1 RT 1: 3332555-3339002 bp 2 RT 2: 7861744-7869374 bp Neighborhood of RT #1 [3332555, 3339079] WGR PRK00050 RVT-Retrons FHA STAS_anti-anti-sigma_factors FHA STAS_anti-anti-sigma_factors zf-ACC zf-ACC Neighborhood of RT #2 [7861744, 7869700] HEAT_2 SWIM RVT-Retrons DoxX_2 mycofact_glyco Feature: gene Location: 3332555-3334447 bp Feature: domain Description: WGR Location: 3334274-3334439 bp Feature: domain Description: WGR Location: 3 3 3 4274-3 3 3 443 9 bp Feature: gene Location: 3334458-3335327 bp Feature: domain Description: PRK00050 Location: 3334473-3335325 bp Feature: domain Description: PRK00050 Location: 3 3 3 4473 -3 3 3 53 25 bp Feature: gene Location: 3335458-3336753 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3335911-3336532 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 3 3 5911-3 3 3 653 2 bp Feature: gene Location: 3336992-3338764 bp Feature: domain Description: FHA Location: 3337031-3337268 bp Feature: domain Description: FHA Location: 3 3 3 703 1-3 3 3 7268 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 3337496-3337793 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 3 3 3 7496-3 3 3 7793 bp Feature: domain Description: FHA Location: 3337931-3338198 bp Feature: domain Description: FHA Location: 3 3 3 793 1-3 3 3 8198 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 3338444-3338729 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 3 3 3 8444-3 3 3 8729 bp Feature: gene Location: 3338828-3339079 bp Feature: domain Description: zf-ACC Location: 3338921-3338948 bp Feature: domain Description: zf-ACC Location: 3 3 3 8921-3 3 3 8948 bp Feature: domain Description: zf-ACC Location: 3338960-3339002 bp Feature: domain Description: zf-ACC Location: 3 3 3 8960-3 3 3 9002 bp Feature: gene Location: 7861744-7864278 bp Feature: domain Description: HEAT_2 Location: 7861990-7862236 bp Feature: domain Description: HEAT_2 Location: 7861990-786223 6 bp Feature: gene Location: 7864275-7865969 bp Feature: domain Description: SWIM Location: 7865823-7865919 bp Feature: domain Description: SWIM Location: 7865823 -7865919 bp Feature: gene Location: 7866359-7867780 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7866926-7867538 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7866926-786753 8 bp Feature: gene Location: 7867899-7868324 bp Feature: domain Description: DoxX_2 Location: 7867938-7868220 bp Feature: domain Description: DoxX_2 Location: 786793 8-7868220 bp Feature: gene Location: 7868522-7869700 bp Feature: domain Description: mycofact_glyco Location: 7868570-7869374 bp Feature: domain Description: mycofact_glyco Location: 7868570-78693 74 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR (smart00773), PRK00050 (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH), RVT-Retrons, FHA (smart00240), STAS_anti-anti-sigma_factors (cd07043), zf-ACC (pfam17848), HEAT_2 (pfam13646), SWIM (pfam04434), DoxX_2 (pfam13564), mycofact_glyco (TIGR03965)