myRT

myRT report for GCA_007754425.1_ASM775442v1

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Seq: CP037452.1 (7704373 bp)
Overview 1 RT 1: 1216974-1221430 bp 2 RT 2: 1377873-1381779 bp 3 RT 3: 1429714-1434383 bp 4 RT 4: 2103531-2109402 bp 5 RT 5: 2943944-2947165 bp 6 RT 6: 2950490-2954118 bp 7 RT 7: 5699040-5703328 bp 8 RT 8: 6930598-6933688 bp 9 RT 9: 6963585-6970203 bp 10 RT 10: 7077460-7081872 bp 11 RT 11: 7241409-7247119 bp 12 RT 12: 7395026-7401110 bp Neighborhood of RT #1 [1216974, 1221510] RVT-GII GIIM PRK00093 Neighborhood of RT #2 [1377873, 1381808] RVT-GII GIIM ISOPREN_C2_like AcrR Neighborhood of RT #3 [1429714, 1434388] RVT-Retrons S2P-M50_SpoIVFB MLE MR_MLE_C Neighborhood of RT #4 [2103531, 2109488] RVT-GII GIIM PPK2_rel_1 P-type_ATPase_H Neighborhood of RT #5 [2943944, 2947386] GntR RVT-GII GIIM CarboxypepD_reg Neighborhood of RT #6 [2950490, 2954135] RVT-GII GIIM COG3547 Neighborhood of RT #7 [5699040, 5703328] FixC RVT-GII GIIM Neighborhood of RT #8 [6930598, 6933688] RVT-GII GIIM Neighborhood of RT #9 [6963585, 6970283] FhlA RVT-GII GIIM Ion_trans_2 TrkA HpnE Neighborhood of RT #10 [7077460, 7081872] thyX MviM RVT-GII GIIM Neighborhood of RT #11 [7241409, 7247202] YhcF iduronate-2-sulfatase RVT-GII GIIM PAS_like Neighborhood of RT #12 [7395026, 7401163] DUF1570 PerM RVT-GII GIIM Pgu1 Beta_helix Beta_helix Beta_helix Feature: gene Location: 1216974-1217156 bp Feature: gene Location: 1217662-1217838 bp Feature: gene Location: 1218010-1219341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1218364-1218988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 8364-1 21 8988 bp Feature: domain Description: GIIM Note: maturase Location: 1219030-1219240 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 9030-1 21 9240 bp Feature: gene Location: 1219451-1219762 bp Feature: gene Location: 1219924-1221510 bp Feature: domain Description: PRK00093 Location: 1220110-1221430 bp Feature: domain Description: PRK00093 Location: 1 2201 1 0-1 221 430 bp Feature: gene Location: 1377873-1378013 bp Feature: gene Location: 1378274-1378450 bp Feature: gene Location: 1378622-1379953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378976-1379600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 378976-1 379600 bp Feature: domain Description: GIIM Note: maturase Location: 1379642-1379852 bp Feature: domain Description: GIIM Note: maturase Location: 1 379642-1 379852 bp Feature: gene Location: 1380050-1381027 bp Feature: domain Description: ISOPREN_C2_like Location: 1380389-1380938 bp Feature: domain Description: ISOPREN_C2_like Location: 1 380389-1 380938 bp Feature: gene Location: 1381236-1381808 bp Feature: domain Description: AcrR Location: 1381251-1381779 bp Feature: domain Description: AcrR Location: 1 381 251 -1 381 779 bp Feature: gene Location: 1429714-1430205 bp Feature: gene Location: 1430315-1430455 bp Feature: gene Location: 1430475-1431767 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1430925-1431543 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 430925-1 431 543 bp Feature: gene Location: 1432321-1433016 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 1432405-1432999 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 1 432405-1 432999 bp Feature: gene Location: 1433036-1434388 bp Feature: domain Description: MLE Location: 1433084-1433240 bp Feature: domain Description: MLE Location: 1 433084-1 433240 bp Feature: domain Description: MR_MLE_C Location: 1433711-1434383 bp Feature: domain Description: MR_MLE_C Location: 1 43371 1 -1 434383 bp Feature: gene Location: 2103531-2103737 bp Feature: gene Location: 2104101-2104277 bp Feature: gene Location: 2104449-2105780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104803-2105427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 04803-21 05427 bp Feature: domain Description: GIIM Note: maturase Location: 2105469-2105679 bp Feature: domain Description: GIIM Note: maturase Location: 21 05469-21 05679 bp Feature: gene Location: 2106014-2106856 bp Feature: domain Description: PPK2_rel_1 Location: 2106029-2106809 bp Feature: domain Description: PPK2_rel_1 Location: 21 06029-21 06809 bp Feature: gene Location: 2106912-2109488 bp Feature: domain Description: P-type_ATPase_H Location: 2107020-2109402 bp Feature: domain Description: P-type_ATPase_H Location: 21 07020-21 09402 bp Feature: gene Location: 2943944-2944651 bp Feature: domain Description: GntR Location: 2943962-2944643 bp Feature: domain Description: GntR Location: 2943962-2944643 bp Feature: gene Location: 2945078-2945254 bp Feature: gene Location: 2945426-2946757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2945780-2946404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2945780-2946404 bp Feature: domain Description: GIIM Note: maturase Location: 2946446-2946656 bp Feature: domain Description: GIIM Note: maturase Location: 2946446-2946656 bp Feature: gene Location: 2946779-2946919 bp Feature: gene Location: 2946940-2947386 bp Feature: domain Description: CarboxypepD_reg Location: 2947051-2947165 bp Feature: domain Description: CarboxypepD_reg Location: 2947051 -29471 65 bp Feature: gene Location: 2950490-2950681 bp Feature: gene Location: 2950823-2950999 bp Feature: gene Location: 2951171-2952502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951525-2952149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951 525-29521 49 bp Feature: domain Description: GIIM Note: maturase Location: 2952191-2952401 bp Feature: domain Description: GIIM Note: maturase Location: 29521 91 -2952401 bp Feature: gene Location: 2952524-2952967 bp Feature: gene Location: 2953056-2954135 bp Feature: domain Description: COG3547 Location: 2953206-2954118 bp Feature: domain Description: COG3547 Location: 2953206-29541 1 8 bp Feature: gene Location: 5699040-5700332 bp Feature: domain Description: FixC Location: 5699085-5700111 bp Feature: domain Description: FixC Location: 5699085-57001 1 1 bp Feature: gene Location: 5700467-5700811 bp Feature: gene Location: 5701157-5702488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5701511-5702135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5701 51 1 -57021 35 bp Feature: domain Description: GIIM Note: maturase Location: 5702177-5702387 bp Feature: domain Description: GIIM Note: maturase Location: 57021 77-5702387 bp Feature: gene Location: 5702660-5702836 bp Feature: gene Location: 5703047-5703328 bp Feature: gene Location: 6930598-6930852 bp Feature: gene Location: 6931063-6931239 bp Feature: gene Location: 6931411-6932742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6931765-6932389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6931 765-6932389 bp Feature: domain Description: GIIM Note: maturase Location: 6932431-6932641 bp Feature: domain Description: GIIM Note: maturase Location: 6932431 -6932641 bp Feature: gene Location: 6932764-6932895 bp Feature: gene Location: 6932969-6933688 bp Feature: gene Location: 6963585-6965588 bp Feature: domain Description: FhlA Location: 6964068-6965559 bp Feature: domain Description: FhlA Location: 6964068-6965559 bp Feature: gene Location: 6965933-6966109 bp Feature: gene Location: 6966281-6967612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6966635-6967259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6966635-6967259 bp Feature: domain Description: GIIM Note: maturase Location: 6967301-6967511 bp Feature: domain Description: GIIM Note: maturase Location: 6967301 -696751 1 bp Feature: gene Location: 6967754-6968812 bp Feature: domain Description: Ion_trans_2 Location: 6967838-6968057 bp Feature: domain Description: Ion_trans_2 Location: 6967838-6968057 bp Feature: domain Description: TrkA Location: 6968129-6968798 bp Feature: domain Description: TrkA Location: 69681 29-6968798 bp Feature: gene Location: 6968823-6970283 bp Feature: domain Description: HpnE Location: 6968886-6970203 bp Feature: domain Description: HpnE Location: 6968886-6970203 bp Feature: gene Location: 7077460-7078368 bp Feature: domain Description: thyX Location: 7077514-7078162 bp Feature: domain Description: thyX Location: 707751 4-70781 62 bp Feature: gene Location: 7078549-7079757 bp Feature: domain Description: MviM Location: 7078696-7079734 bp Feature: domain Description: MviM Location: 7078696-7079734 bp Feature: gene Location: 7079878-7081209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7080232-7080856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7080232-7080856 bp Feature: domain Description: GIIM Note: maturase Location: 7080898-7081108 bp Feature: domain Description: GIIM Note: maturase Location: 7080898-7081 1 08 bp Feature: gene Location: 7081381-7081557 bp Feature: gene Location: 7081699-7081872 bp Feature: gene Location: 7241409-7241810 bp Feature: domain Description: YhcF Location: 7241421-7241778 bp Feature: domain Description: YhcF Location: 7241 421 -7241 778 bp Feature: gene Location: 7241943-7243466 bp Feature: domain Description: iduronate-2-sulfatase Location: 7242093-7243392 bp Feature: domain Description: iduronate-2-sulfatase Location: 7242093-7243392 bp Feature: gene Location: 7243579-7244910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7243933-7244557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7243933-7244557 bp Feature: domain Description: GIIM Note: maturase Location: 7244599-7244809 bp Feature: domain Description: GIIM Note: maturase Location: 7244599-7244809 bp Feature: gene Location: 7245082-7245258 bp Feature: gene Location: 7245577-7247202 bp Feature: domain Description: PAS_like Location: 7245664-7247119 bp Feature: domain Description: PAS_like Location: 7245664-72471 1 9 bp Feature: gene Location: 7395026-7396252 bp Feature: domain Description: DUF1570 Location: 7395764-7396142 bp Feature: domain Description: DUF1 570 Location: 7395764-73961 42 bp Feature: gene Location: 7396401-7397594 bp Feature: domain Description: PerM Location: 7396455-7397544 bp Feature: domain Description: PerM Location: 7396455-7397544 bp Feature: gene Location: 7397703-7399034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7398057-7398681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7398057-7398681 bp Feature: domain Description: GIIM Note: maturase Location: 7398723-7398933 bp Feature: domain Description: GIIM Note: maturase Location: 7398723-7398933 bp Feature: gene Location: 7399206-7399382 bp Feature: gene Location: 7399715-7401163 bp Feature: domain Description: Pgu1 Location: 7399859-7399982 bp Feature: domain Description: Pgu1 Location: 7399859-7399982 bp Feature: domain Description: Beta_helix Location: 7400195-7400477 bp Feature: domain Description: Beta_helix Location: 74001 95-7400477 bp Feature: domain Description: Beta_helix Location: 7400633-7400813 bp Feature: domain Description: Beta_helix Location: 7400633-740081 3 bp Feature: domain Description: Beta_helix Location: 7400912-7401110 bp Feature: domain Description: Beta_helix Location: 740091 2-7401 1 1 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK00093 (GTP-binding protein Der; Reviewed), ISOPREN_C2_like (cl08267), AcrR (COG1309), RVT-Retrons, S2P-M50_SpoIVFB (cd06161), MLE (cd03318), MR_MLE_C (pfam13378), PPK2_rel_1 (TIGR03709)
P-type_ATPase_H (cd02076), GntR (pfam00392), CarboxypepD_reg (pfam13620), COG3547 (Transposase ), FixC (COG0644), FhlA (COG3604), Ion_trans_2 (pfam07885), TrkA (COG0569), HpnE (TIGR03467), thyX (TIGR02170)
MviM (COG0673), YhcF (COG1725), iduronate-2-sulfatase (cd16030), PAS_like (cd16025), DUF1570 (pfam07607), PerM (COG0628), Pgu1 (COG5434), Beta_helix (pfam13229)