myRT

myRT report for GCA_007786475.1_ASM778647v1

Download annotations/find similar RTs

Seq: VNJJ01000005.1 (422133 bp)
Overview 1 RT 1: 326438-330287 bp Neighborhood of RT #1 [326438, 330310] SDH_sah SDH_sah RVT-GII GIIM HTH_XRE ImmA Feature: gene Location: 326438-327307 bp Feature: domain Description: SDH_sah Location: 326447-326795 bp Feature: domain Description: SDH_sah Location: 326447-326795 bp Feature: domain Description: SDH_sah Location: 326948-327218 bp Feature: domain Description: SDH_sah Location: 326948-32721 8 bp Feature: gene Location: 327527-327685 bp Feature: gene Location: 327761-329110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328115-328733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3281 1 5-328733 bp Feature: domain Description: GIIM Note: maturase Location: 328784-328997 bp Feature: domain Description: GIIM Note: maturase Location: 328784-328997 bp Feature: gene Location: 329427-329798 bp Feature: domain Description: HTH_XRE Location: 329454-329562 bp Feature: domain Description: HTH_XRE Location: 329454-329562 bp Feature: gene Location: 329795-330310 bp Feature: domain Description: ImmA Location: 330026-330287 bp Feature: domain Description: ImmA Location: 330026-330287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SDH_sah (pfam01972), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530), ImmA (COG2856)

Seq: VNJJ01000035.1 (1923 bp)
Overview 1 RT 1: 3-1759 bp Neighborhood of RT #1 [3, 1818] RVT-GII GIIM Feature: gene Location: 3-167 bp Feature: gene Location: 526-1818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826-1459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 6-1459 bp Feature: domain Description: GIIM Note: maturase Location: 1555-1759 bp Feature: domain Description: GIIM Note: maturase Location: 1555-1759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VNJJ01000010.1 (159491 bp)
Overview 1 RT 1: 31388-37159 bp Neighborhood of RT #1 [31388, 37833] HTH_LUXR RVT-UG2 HsdM RMtype1_S_BmuCF2ORF3362P_TRD1-CR1_like RMtype1_S_BmuCF2ORF3362P_TRD1-CR1_like Feature: gene Location: 31388-31768 bp Feature: gene Location: 31901-32095 bp Feature: domain Description: HTH_LUXR Location: 31937-32054 bp Feature: domain Description: HTH_LUXR Location: 3 193 7-3 2054 bp Feature: gene Location: 32589-33944 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 32781-33621 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3 2781-3 3 621 bp Feature: gene Location: 34163-35938 bp Feature: domain Description: HsdM Location: 34211-35552 bp Feature: domain Description: HsdM Location: 3 4211-3 5552 bp Feature: gene Location: 35935-37833 bp Feature: domain Description: RMtype1_S_BmuCF2ORF3362P_TRD1-CR1_like Location: 36274-36541 bp Feature: domain Description: RMtype1_S_BmuCF2ORF3 3 62P_TRD1-CR1_like Location: 3 6274-3 6541 bp Feature: domain Description: RMtype1_S_BmuCF2ORF3362P_TRD1-CR1_like Location: 36718-37159 bp Feature: domain Description: RMtype1_S_BmuCF2ORF3 3 62P_TRD1-CR1_like Location: 3 6718-3 7159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_LUXR (smart00421), RVT-UG2, HsdM (COG0286), RMtype1_S_BmuCF2ORF3362P_TRD1-CR1_like (cd17279)