myRT

myRT report for GCA_007827275.1_ASM782727v1

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Seq: VISE01000001.1 (4245106 bp)
Overview 1 RT 1: 847903-853844 bp 2 RT 2: 1638176-1644627 bp 3 RT 3: 1649219-1659937 bp 4 RT 4: 3197373-3207445 bp 5 RT 5: 3389786-3396928 bp 6 RT 6: 3402650-3413811 bp 7 RT 7: 3418732-3430920 bp 8 RT 8: 3436109-3448152 bp 9 RT 9: 3463434-3468160 bp Neighborhood of RT #1 [847903, 853844] Beta-lactamase RVT-GII GIIM Neighborhood of RT #2 [1638176, 1644674] COG3547 Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT-GII GIIM HTH_XRE Neighborhood of RT #3 [1649219, 1659937] COG2405 UPF0175 RVT-GII GIIM RVT-GII GIIM RpoE RVT-GII GIIM PIN_VapC4-5_FitB-like Neighborhood of RT #4 [3197373, 3207465] RVT-GII GIIM PYR_PYL_RCAR_like HTH_ARAC YdiL RVT-GII GIIM AAA_15 TOPRIM_OLD COG2405 Neighborhood of RT #5 [3389786, 3397083] YdiL RVT-GII GIIM Ere-like CarbopepD_reg_2 COG3666 DDE_Tnp_1_6 Neighborhood of RT #6 [3402650, 3413858] COG4185 COG3666 DDE_Tnp_1_6 RVT-GII GIIM ParE COG3666 DDE_Tnp_1_6 RVT-GII GIIM Y1_Tnp COG3547 Neighborhood of RT #7 [3418732, 3430940] PIN_2 RVT-GII GIIM DDE_3 HTH_32 COG3666 DDE_Tnp_1_6 RVT-GII GIIM RVT-GII GIIM COG2405 Neighborhood of RT #8 [3436109, 3448181] upstrm_HI1419 YbbA RVT-GII GIIM bPH_5 RVT-GII GIIM Cyt_C5_DNA_methylase Cyt_C5_DNA_methylase Neighborhood of RT #9 [3463434, 3468207] RVT-GII GIIM HSDR_N_2 PIN_VapC-like Feature: gene Location: 847903-849765 bp Feature: domain Description: Beta-lactamase Location: 848002-848968 bp Feature: domain Description: Beta-lactamase Location: 848002-848968 bp Feature: gene Location: 850009-850245 bp Feature: gene Location: 850758-852017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 850971-851637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 850971 -851 637 bp Feature: domain Description: GIIM Note: maturase Location: 851718-851934 bp Feature: domain Description: GIIM Note: maturase Location: 851 71 8-851 934 bp Feature: gene Location: 852983-853372 bp Feature: gene Location: 853560-853844 bp Feature: gene Location: 1638176-1639078 bp Feature: domain Description: COG3547 Location: 1638359-1639001 bp Feature: domain Description: COG3547 Location: 1 638359-1 639001 bp Feature: gene Location: 1639098-1640492 bp Feature: domain Description: Tnp_DNA_bind Location: 1639122-1639260 bp Feature: domain Description: Tnp_DNA_bind Location: 1 6391 22-1 639260 bp Feature: domain Description: DDE_Tnp_1 Location: 1639683-1640127 bp Feature: domain Description: DDE_Tnp_1 Location: 1 639683-1 6401 27 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1640193-1640475 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1 6401 93-1 640475 bp Feature: gene Location: 1641659-1642918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1641872-1642538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 641 872-1 642538 bp Feature: domain Description: GIIM Note: maturase Location: 1642619-1642835 bp Feature: domain Description: GIIM Note: maturase Location: 1 64261 9-1 642835 bp Feature: gene Location: 1643006-1643557 bp Feature: gene Location: 1644333-1644674 bp Feature: domain Description: HTH_XRE Location: 1644468-1644627 bp Feature: domain Description: HTH_XRE Location: 1 644468-1 644627 bp Feature: gene Location: 1649219-1649719 bp Feature: domain Description: COG2405 Location: 1649237-1649699 bp Feature: domain Description: COG2405 Location: 1 649237-1 649699 bp Feature: gene Location: 1649722-1650003 bp Feature: domain Description: UPF0175 Location: 1649773-1649992 bp Feature: domain Description: UPF01 75 Location: 1 649773-1 649992 bp Feature: gene Location: 1650838-1652097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1651051-1651717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 651 051 -1 651 71 7 bp Feature: domain Description: GIIM Note: maturase Location: 1651798-1652014 bp Feature: domain Description: GIIM Note: maturase Location: 1 651 798-1 65201 4 bp Feature: gene Location: 1652246-1652797 bp Feature: gene Location: 1653858-1655117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1654071-1654737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 654071 -1 654737 bp Feature: domain Description: GIIM Note: maturase Location: 1654818-1655034 bp Feature: domain Description: GIIM Note: maturase Location: 1 65481 8-1 655034 bp Feature: gene Location: 1655345-1655941 bp Feature: gene Location: 1655938-1656441 bp Feature: domain Description: RpoE Location: 1655950-1656433 bp Feature: domain Description: RpoE Location: 1 655950-1 656433 bp Feature: gene Location: 1657029-1657208 bp Feature: gene Location: 1658013-1659272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1658226-1658892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 658226-1 658892 bp Feature: domain Description: GIIM Note: maturase Location: 1658973-1659189 bp Feature: domain Description: GIIM Note: maturase Location: 1 658973-1 6591 89 bp Feature: gene Location: 1659363-1659761 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 1659375-1659753 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 1 659375-1 659753 bp Feature: gene Location: 1659758-1659937 bp Feature: gene Location: 3197373-3197660 bp Feature: gene Location: 3197685-3197867 bp Feature: gene Location: 3198733-3199992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3198946-3199612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 98946-31 9961 2 bp Feature: domain Description: GIIM Note: maturase Location: 3199693-3199909 bp Feature: domain Description: GIIM Note: maturase Location: 31 99693-31 99909 bp Feature: gene Location: 3200082-3200513 bp Feature: domain Description: PYR_PYL_RCAR_like Location: 3200103-3200493 bp Feature: domain Description: PYR_PYL_RCAR_like Location: 32001 03-3200493 bp Feature: gene Location: 3200586-3201440 bp Feature: domain Description: HTH_ARAC Location: 3201177-3201420 bp Feature: domain Description: HTH_ARAC Location: 3201 1 77-3201 420 bp Feature: gene Location: 3201730-3202482 bp Feature: domain Description: YdiL Location: 3201775-3202450 bp Feature: domain Description: YdiL Location: 3201 775-3202450 bp Feature: gene Location: 3203602-3204861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3203815-3204481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320381 5-3204481 bp Feature: domain Description: GIIM Note: maturase Location: 3204562-3204778 bp Feature: domain Description: GIIM Note: maturase Location: 3204562-3204778 bp Feature: gene Location: 3204956-3206794 bp Feature: domain Description: AAA_15 Location: 3204959-3206081 bp Feature: domain Description: AAA_1 5 Location: 3204959-3206081 bp Feature: domain Description: TOPRIM_OLD Location: 3206228-3206456 bp Feature: domain Description: TOPRIM_OLD Location: 3206228-3206456 bp Feature: gene Location: 3206965-3207465 bp Feature: domain Description: COG2405 Location: 3206983-3207445 bp Feature: domain Description: COG2405 Location: 3206983-3207445 bp Feature: gene Location: 3389786-3390622 bp Feature: domain Description: YdiL Location: 3389828-3390527 bp Feature: domain Description: YdiL Location: 3389828-3390527 bp Feature: gene Location: 3390564-3390722 bp Feature: gene Location: 3391612-3392871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3391825-3392491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3391 825-3392491 bp Feature: domain Description: GIIM Note: maturase Location: 3392572-3392788 bp Feature: domain Description: GIIM Note: maturase Location: 3392572-3392788 bp Feature: gene Location: 3392996-3395371 bp Feature: domain Description: Ere-like Location: 3393128-3394052 bp Feature: domain Description: Ere-like Location: 33931 28-3394052 bp Feature: domain Description: CarbopepD_reg_2 Location: 3394265-3394517 bp Feature: domain Description: CarbopepD_reg_2 Location: 3394265-339451 7 bp Feature: gene Location: 3395545-3397083 bp Feature: domain Description: COG3666 Location: 3395551-3396028 bp Feature: domain Description: COG3666 Location: 3395551 -3396028 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3396559-3396928 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 3396559-3396928 bp Feature: gene Location: 3402650-3403243 bp Feature: domain Description: COG4185 Location: 3402668-3403178 bp Feature: domain Description: COG41 85 Location: 3402668-34031 78 bp Feature: gene Location: 3403335-3404903 bp Feature: domain Description: COG3666 Location: 3403344-3403815 bp Feature: domain Description: COG3666 Location: 3403344-340381 5 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3404349-3404718 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 3404349-340471 8 bp Feature: gene Location: 3405774-3407033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3405987-3406653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3405987-3406653 bp Feature: domain Description: GIIM Note: maturase Location: 3406734-3406950 bp Feature: domain Description: GIIM Note: maturase Location: 3406734-3406950 bp Feature: gene Location: 3407123-3407425 bp Feature: domain Description: ParE Location: 3407144-3407411 bp Feature: domain Description: ParE Location: 34071 44-340741 1 bp Feature: gene Location: 3407765-3409303 bp Feature: domain Description: COG3666 Location: 3407771-3408248 bp Feature: domain Description: COG3666 Location: 3407771 -3408248 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3408779-3409148 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 3408779-34091 48 bp Feature: gene Location: 3410175-3411434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3410388-3411054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 0388-341 1 054 bp Feature: domain Description: GIIM Note: maturase Location: 3411135-3411351 bp Feature: domain Description: GIIM Note: maturase Location: 341 1 1 35-341 1 351 bp Feature: gene Location: 3411672-3412136 bp Feature: domain Description: Y1_Tnp Location: 3411729-3412083 bp Feature: domain Description: Y1 _Tnp Location: 341 1 729-341 2083 bp Feature: gene Location: 3412803-3413858 bp Feature: domain Description: COG3547 Location: 3412986-3413811 bp Feature: domain Description: COG3547 Location: 341 2986-341 381 1 bp Feature: gene Location: 3418732-3419184 bp Feature: domain Description: PIN_2 Location: 3418747-3419131 bp Feature: domain Description: PIN_2 Location: 341 8747-341 91 31 bp Feature: gene Location: 3419177-3419386 bp Feature: gene Location: 3420229-3421488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3420442-3421108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3420442-3421 1 08 bp Feature: domain Description: GIIM Note: maturase Location: 3421189-3421405 bp Feature: domain Description: GIIM Note: maturase Location: 3421 1 89-3421 405 bp Feature: gene Location: 3421584-3422141 bp Feature: gene Location: 3422287-3422910 bp Feature: domain Description: DDE_3 Location: 3422341-3422788 bp Feature: domain Description: DDE_3 Location: 3422341 -3422788 bp Feature: gene Location: 3422958-3423422 bp Feature: domain Description: HTH_32 Location: 3423153-3423393 bp Feature: domain Description: HTH_32 Location: 34231 53-3423393 bp Feature: gene Location: 3423459-3424964 bp Feature: domain Description: COG3666 Location: 3423465-3423942 bp Feature: domain Description: COG3666 Location: 3423465-3423942 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3424473-3424842 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 3424473-3424842 bp Feature: gene Location: 3425836-3427095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3426049-3426715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3426049-342671 5 bp Feature: domain Description: GIIM Note: maturase Location: 3426796-3427012 bp Feature: domain Description: GIIM Note: maturase Location: 3426796-342701 2 bp Feature: gene Location: 3427202-3427372 bp Feature: gene Location: 3428480-3429739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3428693-3429359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3428693-3429359 bp Feature: domain Description: GIIM Note: maturase Location: 3429440-3429656 bp Feature: domain Description: GIIM Note: maturase Location: 3429440-3429656 bp Feature: gene Location: 3429796-3430287 bp Feature: gene Location: 3430440-3430940 bp Feature: domain Description: COG2405 Location: 3430458-3430920 bp Feature: domain Description: COG2405 Location: 3430458-3430920 bp Feature: gene Location: 3436109-3436408 bp Feature: domain Description: upstrm_HI1419 Location: 3436121-3436397 bp Feature: domain Description: upstrm_HI1 41 9 Location: 34361 21 -3436397 bp Feature: gene Location: 3436677-3437951 bp Feature: domain Description: YbbA Location: 3436776-3437361 bp Feature: domain Description: YbbA Location: 3436776-3437361 bp Feature: gene Location: 3438766-3440025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3438979-3439645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3438979-3439645 bp Feature: domain Description: GIIM Note: maturase Location: 3439726-3439942 bp Feature: domain Description: GIIM Note: maturase Location: 3439726-3439942 bp Feature: gene Location: 3440101-3440736 bp Feature: domain Description: bPH_5 Location: 3440455-3440728 bp Feature: domain Description: bPH_5 Location: 3440455-3440728 bp Feature: gene Location: 3441006-3441344 bp Feature: gene Location: 3442808-3442981 bp Feature: gene Location: 3443422-3443562 bp Feature: gene Location: 3444299-3445558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3444512-3445178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 344451 2-34451 78 bp Feature: domain Description: GIIM Note: maturase Location: 3445259-3445475 bp Feature: domain Description: GIIM Note: maturase Location: 3445259-3445475 bp Feature: gene Location: 3445762-3446664 bp Feature: gene Location: 3446817-3448181 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 3446937-3446994 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 3446937-3446994 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 3447078-3448152 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 3447078-34481 52 bp Feature: gene Location: 3463434-3463652 bp Feature: gene Location: 3463691-3463933 bp Feature: gene Location: 3464494-3465753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3464707-3465373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3464707-3465373 bp Feature: domain Description: GIIM Note: maturase Location: 3465454-3465670 bp Feature: domain Description: GIIM Note: maturase Location: 3465454-3465670 bp Feature: gene Location: 3465810-3466889 bp Feature: domain Description: HSDR_N_2 Location: 3465939-3466146 bp Feature: domain Description: HSDR_N_2 Location: 3465939-34661 46 bp Feature: gene Location: 3467794-3468207 bp Feature: domain Description: PIN_VapC-like Location: 3467809-3468160 bp Feature: domain Description: PIN_VapC-like Location: 3467809-34681 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT