myRT

myRT report for GCA_007827625.1_ASM782762v1

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Seq: VISU01000032.1 (49736 bp)
Overview 1 RT 1: 16108-23936 bp Neighborhood of RT #1 [16108, 24667] ligC RVT-Retrons HNH_4 Feature: gene Location: 16108-17178 bp Ori: TVZ93209.1 Feature: domain Description: ligC Location: 16159-17116 bp Feature: domain Description: ligC Location: 1 61 59-1 71 1 6 bp Feature: gene Location: 17439-19973 bp Feature: gene Location: 20355-21494 bp Ori: TVZ93211.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20589-21216 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20589-21 21 6 bp Feature: gene Location: 21661-22884 bp Feature: gene Location: 23654-24667 bp Ori: TVZ93213.1 Feature: domain Description: HNH_4 Location: 23780-23936 bp Feature: domain Description: HNH_4 Location: 23780-23936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ligC (PRK08224), RVT-Retrons, HNH_4 (pfam13395)

Seq: VISU01000007.1 (310191 bp)
Overview 1 RT 1: 256364-266590 bp Neighborhood of RT #1 [256364, 266590] pPIWI_RE_Z SF2-N pPIWI_RE_X MID_pPIWI_RE RNaseH_pPIWI_RE RVT-UG22 Feature: gene Location: 256364-259879 bp Ori: TWA03216.1 Feature: domain Description: pPIWI_RE_Z Location: 256448-256889 bp Feature: domain Description: pPIWI_RE_Z Location: 2 56448-2 56889 bp Feature: domain Description: SF2-N Location: 257177-257855 bp Feature: domain Description: SF2 -N Location: 2 57177-2 57855 bp Feature: gene Location: 259915-262794 bp Ori: TWA03217.1 Feature: domain Description: pPIWI_RE_X Location: 259957-261184 bp Feature: domain Description: pPIWI_RE_X Location: 2 59957-2 61184 bp Feature: domain Description: MID_pPIWI_RE Location: 261373-261784 bp Feature: domain Description: MID_pPIWI_RE Location: 2 61373-2 61784 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 261823-262702 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 2 6182 3-2 62 702 bp Feature: gene Location: 263284-264708 bp Ori: TWA03218.1 Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 263419-264007 bp Feature: RT Description: RVT-UG2 2 Note: UG2 2 RT Location: 2 63419-2 64007 bp Feature: gene Location: 264705-265295 bp Feature: gene Location: 265628-266590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pPIWI_RE_Z (pfam18155), SF2-N (cd00046), pPIWI_RE_X, MID_pPIWI_RE (pfam18157), RNaseH_pPIWI_RE, RVT-UG22