myRT

myRT report for GCA_007828435.1_ASM782843v1

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Seq: VIUQ01000005.1 Pseudomonas sp. SJZ094 Ga0314251_105, whole genome shotgun sequence (350475 bp)
Overview 1 RT 1: 29270-37491 bp Neighborhood of RT #1 [29270, 37541] COG3178 RVT_N RVT-GII GIIM HNH LptD PRK10770 Feature: gene Location: 29270-30295 bp Feature: domain Description: COG3178 Location: 29285-30281 bp Feature: domain Description: COG31 78 Location: 29285-30281 bp Feature: gene Location: 30601-30759 bp Feature: gene Location: 31600-33300 bp Feature: domain Description: RVT_N Location: 31657-31900 bp Feature: domain Description: RVT_N Location: 31 657-31 900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31945-32581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 945-32581 bp Feature: domain Description: GIIM Note: maturase Location: 32632-32866 bp Feature: domain Description: GIIM Note: maturase Location: 32632-32866 bp Feature: domain Description: HNH Note: nucleases Location: 33118-33256 bp Feature: domain Description: HNH Note: nucleases Location: 331 1 8-33256 bp Feature: gene Location: 33452-36226 bp Feature: domain Description: LptD Location: 33713-36209 bp Feature: domain Description: LptD Location: 3371 3-36209 bp Feature: gene Location: 36201-37541 bp Feature: domain Description: PRK10770 Location: 36285-37491 bp Feature: domain Description: PRK1 0770 Location: 36285-37491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: VIUQ01000016.1 Pseudomonas sp. SJZ094 Ga0314251_116, whole genome shotgun sequence (166525 bp)
Overview 1 RT 1: 52386-56608 bp Neighborhood of RT #1 [52386, 56608] MFS_YcxA_like HTH_ARSR RVT-GII RVT-GII Feature: gene Location: 52386-53651 bp Feature: domain Description: MFS_YcxA_like Location: 52431-53595 bp Feature: domain Description: MFS_YcxA_like Location: 52 431-53595 bp Feature: gene Location: 53707-54402 bp Feature: domain Description: HTH_ARSR Location: 53752-53971 bp Feature: domain Description: HTH_ARSR Location: 53752 -53971 bp Feature: gene Location: 54559-55353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55243-55351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552 43-55351 bp Feature: gene Location: 55407-55784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55431-55779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55431-55779 bp Feature: gene Location: 55892-56044 bp Feature: gene Location: 56291-56608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_YcxA_like (cd17355), HTH_ARSR (smart00418), RVT-GII