myRT

myRT report for GCA_007828595.1_ASM782859v1

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Seq: VISZ01000043.1 Sinorhizobium medicae strain M19-1 Ga0310601_143, whole genome shotgun sequence (25870 bp)
Overview 1 RT 1: 9058-14912 bp Neighborhood of RT #1 [9058, 14917] MeTrc PAS PAS_10 HWE_HK CheB-CheR_fusion CheR_N RVT-GII Transposase_mut Fet4 Feature: gene Location: 9058-10737 bp Ori: TWA24019.1 Feature: domain Description: MeTrc Location: 9076-9487 bp Feature: domain Description: MeTrc Location: 9076-9487 bp Feature: domain Description: PAS Location: 9619-9928 bp Feature: domain Description: PAS Location: 961 9-9928 bp Feature: domain Description: PAS_10 Location: 10249-10567 bp Feature: domain Description: PAS_1 0 Location: 1 0249-1 0567 bp Feature: domain Description: HWE_HK Location: 10612-10726 bp Feature: domain Description: HWE_HK Location: 1 061 2-1 0726 bp Feature: gene Location: 10836-11975 bp Ori: TWA24020.1 Feature: domain Description: CheB-CheR_fusion Location: 11106-11646 bp Feature: domain Description: CheB-CheR_fusion Location: 1 1 1 06-1 1 646 bp Feature: domain Description: CheR_N Location: 11739-11880 bp Feature: domain Description: CheR_N Location: 1 1 739-1 1 880 bp Feature: gene Location: 12418-12894 bp Ori: TWA24021.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12721-12847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2721 -1 2847 bp Feature: gene Location: 13465-13989 bp Ori: TWA24022.1 Feature: domain Description: Transposase_mut Location: 13477-13954 bp Feature: domain Description: Transposase_mut Location: 1 3477-1 3954 bp Feature: gene Location: 14495-14917 bp Ori: TWA24023.1 Feature: domain Description: Fet4 Location: 14504-14912 bp Feature: domain Description: Fet4 Location: 1 4504-1 491 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MeTrc (smart00138), PAS (smart00091), PAS_10 (pfam13596), HWE_HK (smart00911), CheB-CheR_fusion (cd16434), CheR_N (pfam03705), RVT-GII, Transposase_mut (pfam00872), Fet4 (COG5478)

Seq: VISZ01000040.1 Sinorhizobium medicae strain M19-1 Ga0310601_140, whole genome shotgun sequence (29356 bp)
Overview 1 RT 1: 7652-15101 bp Neighborhood of RT #1 [7652, 15142] RVT-UG20 TPR TPR CHAT Phd Feature: gene Location: 7652-7771 bp Feature: gene Location: 7997-8467 bp Feature: gene Location: 8540-10153 bp Ori: TWA24783.1 Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 8888-9386 bp Feature: RT Description: RVT-UG2 0 Note: UG2 0 RT Location: 8888-9386 bp Feature: gene Location: 10368-14156 bp Ori: TWA24784.1 Feature: domain Description: TPR Location: 11151-11466 bp Feature: domain Description: TPR Location: 11151-11466 bp Feature: domain Description: TPR Location: 12267-12456 bp Feature: domain Description: TPR Location: 12 2 67-12 456 bp Feature: domain Description: CHAT Location: 13410-14064 bp Feature: domain Description: CHAT Location: 13410-14064 bp Feature: gene Location: 14900-15142 bp Ori: TWA24785.1 Feature: domain Description: Phd Location: 14909-15101 bp Feature: domain Description: Phd Location: 14909-15101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG20, TPR (smart00028), CHAT (pfam12770), Phd (COG4118)