myRT

myRT report for GCA_007828805.1_ASM782880v1

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Seq: VIVH01000001.1 Vibrio crassostreae strain SOS2_6 Ga0265673_101, whole genome shotgun sequence (461625 bp)
Overview 1 RT 1: 329936-335084 bp Neighborhood of RT #1 [329936, 335084] COG3547 RVT-Retrons COG1373 Feature: gene Location: 329936-330964 bp Feature: domain Description: COG3547 Location: 329954-330920 bp Feature: domain Description: COG3547 Location: 329954-330920 bp Feature: gene Location: 331310-332275 bp Feature: gene Location: 332272-333204 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 332374-332968 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 332374-332968 bp Feature: gene Location: 333493-334821 bp Feature: domain Description: COG1373 Location: 333502-334660 bp Feature: domain Description: COG1 373 Location: 333502-334660 bp Feature: gene Location: 334914-335084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-Retrons, COG1373 (Predicted ATPase, AAA+ superfamily )

Seq: VIVH01000002.1 Vibrio crassostreae strain SOS2_6 Ga0265673_102, whole genome shotgun sequence (453388 bp)
Overview 1 RT 1: 82181-87138 bp Neighborhood of RT #1 [82181, 87138] PRK15104 PRK10602 RVT_N RVT-GII GIIM Feature: gene Location: 82181-83806 bp Feature: domain Description: PRK15104 Location: 82211-83798 bp Feature: domain Description: PRK15104 Location: 82 2 11-83798 bp Feature: gene Location: 83956-84663 bp Feature: domain Description: PRK10602 Location: 83965-84646 bp Feature: domain Description: PRK10602 Location: 83965-84646 bp Feature: gene Location: 84788-86419 bp Feature: RT Description: RVT_N Location: 84995-85238 bp Feature: RT Description: RVT_N Location: 84995-852 38 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85283-85910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852 83-85910 bp Feature: domain Description: GIIM Note: maturase Location: 85970-86195 bp Feature: domain Description: GIIM Note: maturase Location: 85970-86195 bp Feature: gene Location: 86495-86638 bp Feature: gene Location: 86998-87138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15104 (oligopeptide ABC transporter substrate-binding protein OppA; Provisional), PRK10602 (murein tripeptide amidase MpaA), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)