myRT

myRT report for GCA_007829975.1_ASM782997v1

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Seq: VJWF01000001.1 Caballeronia udeis strain ES_AL-G7 Ga0181140_11, whole genome shotgun sequence (4468171 bp) Associated domains: PRK10738 (OsmC family protein), RVT-GII, GIIM (pfam08388), rplM (PRK09216), rpsI (PRK00132), PRK10818 (septum site-determining protein MinD), PRK13989 (cell division topological specificity factor MinE; Provisional), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), Recombinase (pfam07508)
Zn_ribbon_recom (pfam13408), HTH_23 (pfam13384), HTH_33 (pfam13592), DDE_3 (pfam13358), DUF5372 (pfam17342), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), HTH_Tnp_1 (pfam01527)
Tra5 (COG2801), PinE (COG1961), HTH_17 (pfam12728), DUF4096 (pfam13340), Tra8 (COG2826), COG1669 (Predicted nucleotidyltransferase )

Seq: VJWF01000002.1 Caballeronia udeis strain ES_AL-G7 Ga0181140_12, whole genome shotgun sequence (2903396 bp) Associated domains: DUF5372 (pfam17342), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), rve_3 (pfam13683), InsE (COG2963), DUF346 (pfam03984), Peptidase_C25 (pfam01364), HNHc (smart00507), DEDD_Tnp_IS110 (pfam01548)
Transposase_20 (pfam02371), COG4312 (Predicted dithiol-disulfide oxidoreductase, DUF899 family ), PRK09183 (transposase/IS protein; Provisional), COG5659 (SRSO17 transposase ), COG3547 (Transposase ), RVT_N (pfam13655), DDE_5 (pfam13546), DoxD (pfam04173), PinE (COG1961), Zn_ribbon_recom (pfam13408)
Recombinase (pfam07508), DoxA (pfam07680), PRK06761 (hypothetical protein; Provisional)

Seq: VJWF01000003.1 Caballeronia udeis strain ES_AL-G7 Ga0181140_13, whole genome shotgun sequence (2783099 bp) Associated domains: InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), KfrA_N (pfam11740), RVT_N (pfam13655), HNHc (smart00507), HU (cd13831), YhcG (COG4804), COG3547 (Transposase )
DUF5372 (pfam17342), PinE (COG1961), Zn_ribbon_recom (pfam13408), Recombinase (pfam07508), MFS_MelB_like (cd17332), MPP_GpdQ (cd07402), DDE_3 (pfam13358), HNH (pfam01844), COG4584 (Transposase ), IstB_IS21_ATP (pfam08483)
IstB_IS21 (pfam01695), Resolvase (smart00857), MhpC (COG0596), AA_synth (pfam06684), GntR (pfam00392), Rve (COG3316), INT_P4_C (cd00801), PRK09692 (Integrase; provisional)

Seq: VJWF01000004.1 Caballeronia udeis strain ES_AL-G7 Ga0181140_14, whole genome shotgun sequence (799401 bp) Associated domains: INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII, GIIM (pfam08388), INT_RitA_C_like (cd01188), COG3547 (Transposase ), IS5 (COG3039), SDR_c (cd05233), HemL (COG0001)
LysR (COG0583), RVT_N (pfam13655), HNH (pfam01844), DDE_3 (pfam13358), Arabinose_bd (pfam12625), AraC (COG2207), PHA02517 (putative transposase OrfB; Reviewed), mcbC-like_oxidoreductase, Rve (COG3316)