myRT

myRT report for GCA_007830055.1_ASM783005v1

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Seq: VLLE01000003.1 Lacibacter cauensis strain CGMCC 1.7271 IQ13DRAFT_scaffold00002.2, whole genome shotgun sequence (1126121 bp)
Overview 1 RT 1: 341444-348939 bp Neighborhood of RT #1 [341444, 348962] HsdM N6_Mtase RMtype1_S_EcoJA65PI-TRD1-CR1_like RMtype1_S_EcoJA65PI-TRD1-CR1_like RVT-UG5 GIY-YIG_unchar_2 DUF4357 COG3440 Feature: gene Location: 341444-342856 bp Feature: domain Description: HsdM Location: 341453-341570 bp Feature: domain Description: HsdM Location: 341 453-341 570 bp Feature: domain Description: N6_Mtase Location: 341786-342713 bp Feature: domain Description: N6_Mtase Location: 341 786-34271 3 bp Feature: gene Location: 342932-344407 bp Feature: domain Description: RMtype1_S_EcoJA65PI-TRD1-CR1_like Location: 343127-343484 bp Feature: domain Description: RMtype1 _S_EcoJA65PI-TRD1 -CR1 _like Location: 3431 27-343484 bp Feature: domain Description: RMtype1_S_EcoJA65PI-TRD1-CR1_like Location: 343661-344204 bp Feature: domain Description: RMtype1 _S_EcoJA65PI-TRD1 -CR1 _like Location: 343661 -344204 bp Feature: gene Location: 344419-347445 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 344911-345430 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 34491 1 -345430 bp Feature: gene Location: 347442-348296 bp Feature: domain Description: GIY-YIG_unchar_2 Location: 347601-347835 bp Feature: domain Description: GIY-YIG_unchar_2 Location: 347601 -347835 bp Feature: domain Description: DUF4357 Location: 348123-348276 bp Feature: domain Description: DUF4357 Location: 3481 23-348276 bp Feature: gene Location: 348306-348962 bp Feature: domain Description: COG3440 Location: 348642-348939 bp Feature: domain Description: COG3440 Location: 348642-348939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), N6_Mtase (pfam02384), RMtype1_S_EcoJA65PI-TRD1-CR1_like (cd17256), RVT-UG5, GIY-YIG_unchar_2 (cd10447), DUF4357 (pfam14267), COG3440 (Predicted restriction endonuclease )

Seq: VLLE01000008.1 Lacibacter cauensis strain CGMCC 1.7271 IQ13DRAFT_scaffold00007.7, whole genome shotgun sequence (118512 bp)
Overview 1 RT 1: 41818-48458 bp Neighborhood of RT #1 [41818, 48478] HEPN_Apea RVT-UG7 DUF2779 WYL Feature: gene Location: 41818-42462 bp Feature: gene Location: 42496-43842 bp Feature: domain Description: HEPN_Apea Location: 43288-43588 bp Feature: domain Description: HEPN_Apea Location: 432 88-43588 bp Feature: gene Location: 43993-45549 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 44371-44794 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 44371-44794 bp Feature: gene Location: 45623-47458 bp Feature: domain Description: DUF2779 Location: 46706-47117 bp Feature: domain Description: DUF2 779 Location: 46706-47117 bp Feature: gene Location: 47468-48478 bp Feature: domain Description: WYL Location: 47930-48458 bp Feature: domain Description: WYL Location: 47930-48458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_Apea (pfam18739), RVT-UG7, DUF2779 (pfam11074), WYL (pfam13280)