myRT

myRT report for GCA_007830635.1_ASM783063v1

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Seq: VLLA01000029.1 Bradyrhizobium huanghuaihaiense strain CGMCC 1.10948 IQ16DRAFT_scaffold00029.29, whole genome shotgun sequence (72841 bp)
Overview 1 RT 1: 20606-24084 bp Neighborhood of RT #1 [20606, 24084] Tra5 HTH_Tnp_1 RVT-GII GIIM Feature: gene Location: 20606-21478 bp Feature: domain Description: Tra5 Location: 20648-21356 bp Feature: domain Description: Tra5 Location: 20648-21 356 bp Feature: gene Location: 21456-21761 bp Feature: domain Description: HTH_Tnp_1 Location: 21513-21720 bp Feature: domain Description: HTH_Tnp_1 Location: 21 51 3-21 720 bp Feature: gene Location: 21887-23185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22142-22799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 42-22799 bp Feature: domain Description: GIIM Note: maturase Location: 22877-23105 bp Feature: domain Description: GIIM Note: maturase Location: 22877-231 05 bp Feature: gene Location: 23191-23331 bp Feature: gene Location: 23950-24084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388)

Seq: VLLA01000053.1 Bradyrhizobium huanghuaihaiense strain CGMCC 1.10948 IQ16DRAFT_scaffold00053.53, whole genome shotgun sequence (22922 bp)
Overview 1 RT 1: 3802-8273 bp Neighborhood of RT #1 [3802, 8273] PHA02518 LomR RVT-GII RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 3802-4470 bp Feature: domain Description: PHA02518 Location: 3811-4408 bp Feature: domain Description: PHA02 518 Location: 3811-4408 bp Feature: gene Location: 4914-5750 bp Feature: domain Description: LomR Location: 4950-5661 bp Feature: domain Description: LomR Location: 4950-5661 bp Feature: gene Location: 6037-6288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6043-6274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6043-62 74 bp Feature: gene Location: 6237-7007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6246-6633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 46-6633 bp Feature: domain Description: GIIM Note: maturase Location: 6699-6921 bp Feature: domain Description: GIIM Note: maturase Location: 6699-692 1 bp Feature: gene Location: 7244-7969 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7262-7697 bp Feature: domain Description: DDE_Tnp_IS66 Location: 72 62 -7697 bp Feature: gene Location: 8097-8273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02518 (ParA-like protein; Provisional), LomR (COG3637), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: VLLA01000058.1 Bradyrhizobium huanghuaihaiense strain CGMCC 1.10948 IQ16DRAFT_scaffold00058.58, whole genome shotgun sequence (15438 bp)
Overview 1 RT 1: 12473-14877 bp Neighborhood of RT #1 [12473, 14877] group_II_RT_mat RVT-GII Feature: gene Location: 12473-12619 bp Feature: gene Location: 12690-13220 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 12699-13113 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 12699-13 113 bp Feature: gene Location: 13269-13958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13596-13917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 596-13 917 bp Feature: gene Location: 14320-14535 bp Feature: gene Location: 14575-14877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII

Seq: VLLA01000061.1 Bradyrhizobium huanghuaihaiense strain CGMCC 1.10948 IQ16DRAFT_scaffold00061.61, whole genome shotgun sequence (14424 bp)
Overview 1 RT 1: 7471-10328 bp Neighborhood of RT #1 [7471, 10328] RVT-GII GIIM Feature: gene Location: 7471-7683 bp Feature: gene Location: 7893-8294 bp Feature: gene Location: 8316-9545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8517-9174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8517-9174 bp Feature: domain Description: GIIM Note: maturase Location: 9249-9453 bp Feature: domain Description: GIIM Note: maturase Location: 924 9-94 53 bp Feature: gene Location: 9769-9999 bp Feature: gene Location: 10137-10328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VLLA01000079.1 Bradyrhizobium huanghuaihaiense strain CGMCC 1.10948 IQ16DRAFT_scaffold00079.79, whole genome shotgun sequence (5788 bp)
Overview 1 RT 1: 3053-5334 bp Neighborhood of RT #1 [3053, 5711] MmsB RVT-GII Feature: gene Location: 3053-3478 bp Feature: gene Location: 3735-4229 bp Feature: domain Description: MmsB Location: 3747-3861 bp Feature: domain Description: MmsB Location: 3747-3861 bp Feature: gene Location: 4236-5711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4644-5334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4644-5 334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MmsB (COG2084), RVT-GII