myRT

myRT report for GCA_007844305.1_ASM784430v1

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Seq: NCXS01000025.1 Denitratisoma oestradiolicum strain DSM 16959 scaffold_24, whole genome shotgun sequence (35600 bp)
Overview 1 RT 1: 43-2653 bp Neighborhood of RT #1 [43, 2718] RVT-GII GIIM HTH_18 Aes Feature: gene Location: 43-609 bp Ori: TWO79105.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46-148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46-1 48 bp Feature: domain Description: GIIM Note: maturase Location: 190-394 bp Feature: domain Description: GIIM Note: maturase Location: 1 90-394 bp Feature: gene Location: 670-1578 bp Ori: TWO79080.1 Feature: domain Description: HTH_18 Location: 1237-1465 bp Feature: domain Description: HTH_1 8 Location: 1 237-1 465 bp Feature: gene Location: 1702-2718 bp Ori: TWO79106.1 Feature: domain Description: Aes Location: 1924-2653 bp Feature: domain Description: Aes Location: 1 924-2653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_18 (pfam12833), Aes (COG0657)

Seq: NCXS01000006.1 Denitratisoma oestradiolicum strain DSM 16959 scaffold_5, whole genome shotgun sequence (193073 bp)
Overview 1 RT 1: 185794-192897 bp Neighborhood of RT #1 [185794, 192953] MhpC 5beta-POR_like_SDR_a RVT-UG28 DUF4917 COG3666 DDE_Tnp_1 Feature: gene Location: 185794-186804 bp Ori: TWO80802.1 Feature: domain Description: MhpC Location: 185857-186661 bp Feature: domain Description: MhpC Location: 185857-186661 bp Feature: gene Location: 186875-187966 bp Ori: TWO80803.1 Feature: domain Description: 5beta-POR_like_SDR_a Location: 186890-187763 bp Feature: domain Description: 5beta-POR_like_SDR_a Location: 186890-187763 bp Feature: gene Location: 188341-189843 bp Ori: TWO80804.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 188626-189262 bp Feature: RT Description: RVT-UG2 8 Note: UG2 8 RT Location: 18862 6-1892 62 bp Feature: gene Location: 190158-191195 bp Ori: TWO80805.1 Feature: domain Description: DUF4917 Location: 190227-191190 bp Feature: domain Description: DUF4917 Location: 1902 2 7-191190 bp Feature: gene Location: 191523-192953 bp Ori: TWO80806.1 Feature: domain Description: COG3666 Location: 191538-192012 bp Feature: domain Description: COG3666 Location: 191538-192 012 bp Feature: domain Description: DDE_Tnp_1 Location: 192201-192897 bp Feature: domain Description: DDE_Tnp_1 Location: 192 2 01-192 897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), 5beta-POR_like_SDR_a (cd08948), RVT-UG28, DUF4917 (pfam16263), COG3666 (Transposase ), DDE_Tnp_1 (pfam01609)

Seq: NCXS01000026.1 Denitratisoma oestradiolicum strain DSM 16959 scaffold_25, whole genome shotgun sequence (30239 bp)
Overview 1 RT 1: 24504-29982 bp Neighborhood of RT #1 [24504, 30197] SMC_prok_B QueF-II RVT-GII GIIM Feature: gene Location: 24504-28004 bp Ori: TWO79077.1 Feature: domain Description: SMC_prok_B Location: 24510-27966 bp Feature: domain Description: SMC_prok_B Location: 24510-27966 bp Feature: gene Location: 28092-28511 bp Ori: TWO79078.1 Feature: domain Description: QueF-II Location: 28113-28443 bp Feature: domain Description: QueF-II Location: 28113 -28443 bp Feature: gene Location: 29631-30197 bp Ori: TWO79079.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29634-29736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2963 4-2973 6 bp Feature: domain Description: GIIM Note: maturase Location: 29778-29982 bp Feature: domain Description: GIIM Note: maturase Location: 29778-29982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_B (TIGR02168), QueF-II (TIGR03139), RVT-GII, GIIM (pfam08388)