myRT

myRT report for GCA_007858365.1_ASM785836v1

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Seq: VFIO01000011.1 Pseudomonas sp. DSM 108989 11_147304_21.4189, whole genome shotgun sequence (147304 bp)
Overview 1 RT 1: 133151-140900 bp Neighborhood of RT #1 [133151, 140917] P-type_ATPase_HM_ZosA_PfeT-like DUF2790 RVT-GII GIIM 2A0601 Feature: gene Location: 133151-135148 bp Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 133241-135128 bp Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 1 33241 -1 351 28 bp Feature: gene Location: 135350-135673 bp Feature: domain Description: DUF2790 Location: 135461-135659 bp Feature: domain Description: DUF2790 Location: 1 35461 -1 35659 bp Feature: gene Location: 135858-137279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136215-136830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3621 5-1 36830 bp Feature: domain Description: GIIM Note: maturase Location: 136884-137112 bp Feature: domain Description: GIIM Note: maturase Location: 1 36884-1 371 1 2 bp Feature: gene Location: 137429-137599 bp Feature: gene Location: 137756-140917 bp Feature: domain Description: 2A0601 Location: 137759-140900 bp Feature: domain Description: 2A0601 Location: 1 37759-1 40900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P-type_ATPase_HM_ZosA_PfeT-like (cd07551), DUF2790 (pfam10976), RVT-GII, GIIM (pfam08388), 2A0601 (TIGR00914)

Seq: VFIO01000016.1 Pseudomonas sp. DSM 108989 16_60611_27.2822, whole genome shotgun sequence (60611 bp)
Overview 1 RT 1: 9515-15297 bp Neighborhood of RT #1 [9515, 15317] DegQ DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 9515-10690 bp Feature: domain Description: DegQ Location: 9620-10679 bp Feature: domain Description: DegQ Location: 962 0-10679 bp Feature: gene Location: 11445-11579 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 11451-11562 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 11451-11562 bp Feature: gene Location: 11771-13432 bp Feature: RT Description: RVT_N Location: 11816-12059 bp Feature: RT Description: RVT_N Location: 11816-12 059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12104-12740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 104-12 740 bp Feature: domain Description: GIIM Note: maturase Location: 12797-13025 bp Feature: domain Description: GIIM Note: maturase Location: 12 797-1302 5 bp Feature: gene Location: 13475-13618 bp Feature: gene Location: 13989-15317 bp Feature: domain Description: LZ_Tnp_IS66 Location: 14115-14334 bp Feature: domain Description: LZ_Tnp_IS66 Location: 14115-14334 bp Feature: domain Description: zf-IS66 Location: 14355-14481 bp Feature: domain Description: zf-IS66 Location: 14355-14481 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14523-15297 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1452 3-152 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DegQ (pfam08181)