myRT

myRT report for GCA_007858825.1_ASM785882v1

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Seq: VFED01000228.1 Vibrio cyclitrophicus strain T5 contig_101_1, whole genome shotgun sequence (5843 bp)
Overview 1 RT 1: 132-2926 bp Neighborhood of RT #1 [132, 2931] RVT_N RVT-GII GIIM OMP_b-brl Feature: gene Location: 132-1604 bp Feature: domain Description: RVT_N Location: 180-423 bp Feature: domain Description: RVT_N Location: 1 80-423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 468-1095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 468-1 095 bp Feature: domain Description: GIIM Note: maturase Location: 1155-1380 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 55-1 380 bp Feature: gene Location: 1828-1983 bp Feature: gene Location: 2431-2931 bp Feature: domain Description: OMP_b-brl Location: 2464-2926 bp Feature: domain Description: OMP_b-brl Location: 2464-2926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), OMP_b-brl (pfam13505)

Seq: VFED01000214.1 Vibrio cyclitrophicus strain T5 contig_5_1, whole genome shotgun sequence (211992 bp)
Overview 1 RT 1: 82850-95098 bp Neighborhood of RT #1 [82850, 95103] DUF3360 AE_Prim_S_like RVT-UG10 pheT pheS Feature: gene Location: 82850-84358 bp Feature: domain Description: DUF3360 Location: 82898-84344 bp Feature: domain Description: DUF3360 Location: 82 898-84344 bp Feature: gene Location: 84474-85400 bp Feature: gene Location: 86144-91471 bp Feature: domain Description: AE_Prim_S_like Location: 86219-86534 bp Feature: domain Description: AE_Prim_S_like Location: 862 19-86534 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 87476-88136 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 87476-88136 bp Feature: gene Location: 91621-94008 bp Feature: domain Description: pheT Location: 91624-94006 bp Feature: domain Description: pheT Location: 9162 4-94006 bp Feature: gene Location: 94027-95103 bp Feature: domain Description: pheS Location: 94120-95098 bp Feature: domain Description: pheS Location: 9412 0-95098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3360 (pfam11840), AE_Prim_S_like (cl01287), RVT-UG10, pheT (PRK09616), pheS (TIGR00468)