myRT

myRT report for GCA_007858905.1_ASM785890v1

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Seq: VFEJ01000130.1 Vibrio crassostreae strain S16 contig_12_1, whole genome shotgun sequence (333913 bp)
Overview 1 RT 1: 246995-251944 bp Neighborhood of RT #1 [246995, 251952] RVT_N RVT-GII GIIM PRK10602 PRK15104 Feature: gene Location: 246995-247135 bp Feature: gene Location: 247495-247638 bp Feature: gene Location: 247873-249345 bp Feature: RT Description: RVT_N Location: 247921-248164 bp Feature: RT Description: RVT_N Location: 247921 -2481 64 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248209-248836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248209-248836 bp Feature: domain Description: GIIM Note: maturase Location: 248896-249121 bp Feature: domain Description: GIIM Note: maturase Location: 248896-2491 21 bp Feature: gene Location: 249470-250177 bp Feature: domain Description: PRK10602 Location: 249479-250160 bp Feature: domain Description: PRK1 0602 Location: 249479-2501 60 bp Feature: gene Location: 250327-251952 bp Feature: domain Description: PRK15104 Location: 250357-251944 bp Feature: domain Description: PRK1 51 04 Location: 250357-251 944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK10602 (murein tripeptide amidase MpaA), PRK15104 (oligopeptide ABC transporter substrate-binding protein OppA; Provisional)

Seq: VFEJ01000062.1 Vibrio crassostreae strain S16 contig_17_1, whole genome shotgun sequence (14646 bp)
Overview 1 RT 1: 9501-13715 bp Neighborhood of RT #1 [9501, 13993] Smc Smc Smc RVT-Retrons Feature: gene Location: 9501-11390 bp Feature: domain Description: Smc Location: 9570-9660 bp Feature: domain Description: Smc Location: 9570-9660 bp Feature: domain Description: Smc Location: 10086-10461 bp Feature: domain Description: Smc Location: 10086-10461 bp Feature: domain Description: Smc Location: 10602-10941 bp Feature: domain Description: Smc Location: 10602 -10941 bp Feature: gene Location: 11403-12587 bp Feature: gene Location: 12845-13993 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13067-13715 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13067-13715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Smc (COG1196)