myRT

myRT report for GCA_007859715.1_ASM785971v1

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Seq: SJPG01000001.1 Planctomycetes bacterium Pan54 Pan54_contig00001, whole genome shotgun sequence (6680363 bp)
Overview 1 RT 1: 1965322-1967888 bp 2 RT 2: 5289732-5292383 bp 3 RT 3: 5630886-5635072 bp 4 RT 4: 6446200-6455301 bp Neighborhood of RT #1 [1965322, 1967914] RVT-G2Lb DraG Neighborhood of RT #2 [5289732, 5292383] RVT-Retrons Neighborhood of RT #3 [5630886, 5635072] RVT-CRISPR Cas1_I-II-III Neighborhood of RT #4 [6446200, 6455315] DUF4297 RVT-UG1 HTH_7 zinc_ribbon_2 zinc_ribbon_2 Feature: gene Location: 1965322-1965708 bp Feature: gene Location: 1965797-1965985 bp Feature: gene Location: 1966002-1967123 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 1966356-1966917 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 1 966356-1 96691 7 bp Feature: gene Location: 1967129-1967278 bp Feature: gene Location: 1967489-1967914 bp Feature: domain Description: DraG Location: 1967651-1967888 bp Feature: domain Description: DraG Location: 1 967651 -1 967888 bp Feature: gene Location: 5289732-5290130 bp Feature: gene Location: 5290222-5290371 bp Feature: gene Location: 5290453-5291790 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5290942-5291563 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5290942-5291 563 bp Feature: gene Location: 5291958-5292089 bp Feature: gene Location: 5292219-5292383 bp Feature: gene Location: 5630886-5631122 bp Feature: gene Location: 5631496-5631642 bp Feature: gene Location: 5631713-5633182 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5632013-5632625 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 563201 3-5632625 bp Feature: gene Location: 5633330-5634415 bp Feature: domain Description: Cas1_I-II-III Location: 5633510-5634371 bp Feature: domain Description: Cas1 _I-II-III Location: 563351 0-5634371 bp Feature: gene Location: 5634749-5635072 bp Feature: gene Location: 6446200-6446748 bp Feature: gene Location: 6446745-6447896 bp Feature: domain Description: DUF4297 Location: 6446796-6447429 bp Feature: domain Description: DUF4297 Location: 6446796-6447429 bp Feature: gene Location: 6448448-6452260 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 6449048-6449540 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 6449048-6449540 bp Feature: gene Location: 6452603-6454789 bp Feature: domain Description: HTH_7 Location: 6454625-6454730 bp Feature: domain Description: HTH_7 Location: 6454625-6454730 bp Feature: gene Location: 6454944-6455315 bp Feature: domain Description: zinc_ribbon_2 Location: 6454974-6455034 bp Feature: domain Description: zinc_ribbon_2 Location: 6454974-6455034 bp Feature: domain Description: zinc_ribbon_2 Location: 6455286-6455301 bp Feature: domain Description: zinc_ribbon_2 Location: 6455286-6455301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2Lb, DraG (COG1397), RVT-Retrons, RVT-CRISPR, Cas1_I-II-III (cl00656), DUF4297 (pfam14130), RVT-UG1, HTH_7 (pfam02796), zinc_ribbon_2 (pfam13240)