myRT

myRT report for GCA_007859995.1_ASM785999v1

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Seq: SMSL01000001.1 Candidatus Brocadiaceae bacterium S225 S225a_contig00001, whole genome shotgun sequence (270441 bp)
Overview 1 RT 1: 88198-92869 bp Neighborhood of RT #1 [88198, 92869] RVT-GII INT_Rci_Hp1_C Feature: gene Location: 88198-89775 bp Feature: gene Location: 90226-90705 bp Feature: gene Location: 90987-91349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91086-91287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 086-91 287 bp Feature: gene Location: 91746-92483 bp Feature: domain Description: INT_Rci_Hp1_C Location: 91893-92352 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 91 893-92352 bp Feature: gene Location: 92525-92869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, INT_Rci_Hp1_C (cd00796)

Seq: SMSL01000003.1 Candidatus Brocadiaceae bacterium S225 S225a_contig00003, whole genome shotgun sequence (252072 bp)
Overview 1 RT 1: 226918-230538 bp Neighborhood of RT #1 [226918, 230552] UvrA RVT-DGRs MutS_I Avd_like Feature: gene Location: 226918-227070 bp Feature: gene Location: 227280-228230 bp Feature: domain Description: UvrA Location: 227331-228228 bp Feature: domain Description: UvrA Location: 2 2 7331-2 2 82 2 8 bp Feature: gene Location: 228351-229415 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 228357-228801 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 2 8357-2 2 8801 bp Feature: domain Description: MutS_I Location: 229113-229338 bp Feature: domain Description: MutS_I Location: 2 2 9113-2 2 9338 bp Feature: gene Location: 229566-229829 bp Feature: gene Location: 230202-230552 bp Feature: domain Description: Avd_like Location: 230229-230538 bp Feature: domain Description: Avd_like Location: 2 302 2 9-2 30538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrA (COG0178), RVT-DGRs, MutS_I (pfam01624), Avd_like (cd16376)

Seq: SMSL01000017.1 Candidatus Brocadiaceae bacterium S225 S225a_contig00017, whole genome shotgun sequence (76697 bp)
Overview 1 RT 1: 60989-64148 bp Neighborhood of RT #1 [60989, 64148] Cas1_I-II-III RVT-CRISPR RAYT Feature: gene Location: 60989-61294 bp Feature: gene Location: 61318-62319 bp Feature: domain Description: Cas1_I-II-III Location: 61327-62284 bp Feature: domain Description: Cas1_I-II-III Location: 613 27-62284 bp Feature: gene Location: 62354-63052 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 62360-62924 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 623 60-62924 bp Feature: gene Location: 63257-63883 bp Feature: domain Description: RAYT Location: 63299-63770 bp Feature: domain Description: RAYT Location: 63 299-63 770 bp Feature: gene Location: 63906-64148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), RVT-CRISPR, RAYT (COG1943)