myRT

myRT report for GCA_007860045.1_ASM786004v1

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Seq: SJPN01000001.1 Planctomycetes bacterium Pla52n Pla52n_contig00001, whole genome shotgun sequence (1611970 bp)
Overview 1 RT 1: 482489-485917 bp 2 RT 2: 731720-735701 bp Neighborhood of RT #1 [482489, 485917] RVT-GII Neighborhood of RT #2 [731720, 735701] CRISPR_Cas6 RVT-CRISPR Feature: gene Location: 482489-482872 bp Feature: gene Location: 482972-483817 bp Feature: gene Location: 483954-484568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484221-484389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484221 -484389 bp Feature: gene Location: 484973-485650 bp Feature: gene Location: 485657-485917 bp Feature: gene Location: 731720-732013 bp Feature: gene Location: 732055-732282 bp Feature: gene Location: 732453-734333 bp Feature: domain Description: CRISPR_Cas6 Location: 732942-733323 bp Feature: domain Description: CRISPR_Cas6 Location: 732942-733323 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 733518-734097 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 73351 8-734097 bp Feature: gene Location: 735145-735279 bp Feature: gene Location: 735462-735701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, CRISPR_Cas6 (pfam10040), RVT-CRISPR

Seq: SJPN01000002.1 Planctomycetes bacterium Pla52n Pla52n_contig00002, whole genome shotgun sequence (1536778 bp)
Overview 1 RT 1: 146834-149188 bp Neighborhood of RT #1 [146834, 149188] RVT-GII Feature: gene Location: 146834-147232 bp Feature: gene Location: 147800-148012 bp Feature: gene Location: 148023-148466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148047-148416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148047-148416 bp Feature: gene Location: 148599-148799 bp Feature: gene Location: 148970-149188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SJPN01000003.1 Planctomycetes bacterium Pla52n Pla52n_contig00003, whole genome shotgun sequence (1272572 bp)
Overview 1 RT 1: 316679-319802 bp 2 RT 2: 480472-482947 bp 3 RT 3: 600464-604594 bp Neighborhood of RT #1 [316679, 319802] RVT-GII Neighborhood of RT #2 [480472, 482947] RVT-GII Neighborhood of RT #3 [600464, 604594] RVT-GII GIIM Feature: gene Location: 316679-317440 bp Feature: gene Location: 317513-317962 bp Feature: gene Location: 317956-318546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 318304-318493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 183 04-3 18493 bp Feature: gene Location: 318835-319071 bp Feature: gene Location: 319173-319802 bp Feature: gene Location: 480472-480687 bp Feature: gene Location: 480861-480995 bp Feature: gene Location: 481243-481536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481339-481510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4813 3 9-481510 bp Feature: gene Location: 481658-482350 bp Feature: gene Location: 482705-482947 bp Feature: gene Location: 600464-601795 bp Feature: gene Location: 601802-602056 bp Feature: gene Location: 602692-603546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602908-603076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602908-603 076 bp Feature: domain Description: GIIM Note: maturase Location: 603121-603274 bp Feature: domain Description: GIIM Note: maturase Location: 603 121-603 274 bp Feature: gene Location: 603645-604145 bp Feature: gene Location: 604277-604594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SJPN01000004.1 Planctomycetes bacterium Pla52n Pla52n_contig00004, whole genome shotgun sequence (1170852 bp)
Overview 1 RT 1: 244290-248475 bp Neighborhood of RT #1 [244290, 248786] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 244290-244733 bp Feature: gene Location: 245056-245667 bp Feature: gene Location: 245777-246631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245780-246188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 5780-24 6188 bp Feature: domain Description: GIIM Note: maturase Location: 246233-246440 bp Feature: domain Description: GIIM Note: maturase Location: 24 6233-24 64 4 0 bp Feature: gene Location: 246936-247106 bp Feature: gene Location: 247350-248786 bp Feature: domain Description: DDE_Tnp_1 Location: 247776-248475 bp Feature: domain Description: DDE_Tnp_1 Location: 24 7776-24 84 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)

Seq: SJPN01000006.1 Planctomycetes bacterium Pla52n Pla52n_contig00006, whole genome shotgun sequence (614891 bp)
Overview 1 RT 1: 89488-94843 bp 2 RT 2: 197070-199229 bp Neighborhood of RT #1 [89488, 94843] SBP_bac_10 SBP_bac_10 RVT-GII Neighborhood of RT #2 [197070, 199229] stabl_stabl_stabl_TIGR02574 RVT-GII Feature: gene Location: 89488-90429 bp Feature: domain Description: SBP_bac_10 Location: 89761-90190 bp Feature: domain Description: SBP_bac_10 Location: 89761-90190 bp Feature: domain Description: SBP_bac_10 Location: 90250-90334 bp Feature: domain Description: SBP_bac_10 Location: 9025 0-90334 bp Feature: gene Location: 90538-90918 bp Feature: gene Location: 90954-92909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91362-92052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91362-9205 2 bp Feature: gene Location: 92492-93997 bp Feature: gene Location: 94376-94843 bp Feature: gene Location: 197070-197297 bp Feature: domain Description: stabl_stabl_stabl_TIGR02574 Location: 197109-197280 bp Feature: domain Description: stabl_stabl_stabl_TIGR025 74 Location: 197109-197280 bp Feature: gene Location: 197651-198031 bp Feature: gene Location: 198323-198685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198422-198590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198422-1985 90 bp Feature: gene Location: 198733-198888 bp Feature: gene Location: 199056-199229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SBP_bac_10 (pfam07596), RVT-GII, stabl_stabl_stabl_TIGR02574

Seq: SJPN01000007.1 Planctomycetes bacterium Pla52n Pla52n_contig00007, whole genome shotgun sequence (461046 bp)
Overview 1 RT 1: 70221-74729 bp Neighborhood of RT #1 [70221, 74729] RVT-GII Feature: gene Location: 70221-70997 bp Feature: gene Location: 72029-72448 bp Feature: gene Location: 72623-73111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72791-72962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72791-7296 2 bp Feature: gene Location: 73373-73888 bp Feature: gene Location: 73866-74729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SJPN01000009.1 Planctomycetes bacterium Pla52n Pla52n_contig00009, whole genome shotgun sequence (271035 bp)
Overview 1 RT 1: 115194-122837 bp Neighborhood of RT #1 [115194, 122837] LRR_RI RVT-GII GIIM DUF4062 RVT-GII Feature: gene Location: 115194-115907 bp Feature: domain Description: LRR_RI Location: 115524-115806 bp Feature: domain Description: LRR_RI Location: 115524-115806 bp Feature: gene Location: 115986-116336 bp Feature: gene Location: 116477-117304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116702-116864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1167 02-116864 bp Feature: domain Description: GIIM Note: maturase Location: 116915-117137 bp Feature: domain Description: GIIM Note: maturase Location: 116915-117 137 bp Feature: gene Location: 117561-117776 bp Feature: gene Location: 118126-119031 bp Feature: domain Description: DUF4062 Location: 118150-118396 bp Feature: domain Description: DUF4062 Location: 118150-118396 bp Feature: gene Location: 119619-119903 bp Feature: gene Location: 120101-120478 bp Feature: gene Location: 120796-121305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121012-121183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121012-121183 bp Feature: gene Location: 121556-121933 bp Feature: gene Location: 122133-122837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LRR_RI (smart00368), RVT-GII, GIIM (pfam08388), DUF4062 (pfam13271)

Seq: SJPN01000020.1 Planctomycetes bacterium Pla52n Pla52n_contig00020, whole genome shotgun sequence (35340 bp)
Overview 1 RT 1: 3-5394 bp 2 RT 2: 15938-18815 bp Neighborhood of RT #1 [3, 5394] RVT-GII RVT-GII GIIM Neighborhood of RT #2 [15938, 18815] RVT-GII GIIM Feature: gene Location: 3-536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-534 bp Feature: gene Location: 126-800 bp Feature: gene Location: 824-1060 bp Feature: gene Location: 2091-2294 bp Feature: gene Location: 2494-2793 bp Feature: gene Location: 2933-3958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3152-3320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3152-3320 bp Feature: domain Description: GIIM Note: maturase Location: 3365-3518 bp Feature: domain Description: GIIM Note: maturase Location: 3365-3518 bp Feature: gene Location: 4215-4430 bp Feature: gene Location: 4765-5394 bp Feature: gene Location: 15938-16147 bp Feature: gene Location: 16228-16362 bp Feature: gene Location: 16610-17299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16712-16877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16712-168 77 bp Feature: domain Description: GIIM Note: maturase Location: 16922-17156 bp Feature: domain Description: GIIM Note: maturase Location: 16922-17156 bp Feature: gene Location: 17453-18112 bp Feature: gene Location: 18018-18815 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)