myRT

myRT report for GCA_007860075.1_ASM786007v1

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Seq: SJPP01000002.1 Planctomycetes bacterium CA54 CA54_contig00002, whole genome shotgun sequence (1385916 bp)
Overview 1 RT 1: 349677-356032 bp Neighborhood of RT #1 [349677, 356058] ArdC RVT-UG16 HTH_31 HsdM Feature: gene Location: 349677-350627 bp Ori: TWU08882.1 Gene: traC Feature: domain Description: ArdC Location: 349701-350595 bp Feature: domain Description: ArdC Location: 349701 -350595 bp Feature: gene Location: 350952-352184 bp Feature: gene Location: 352622-354094 bp Ori: TWU08884.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 353003-353405 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 353003-353405 bp Feature: gene Location: 354102-354419 bp Ori: TWU08885.1 Feature: domain Description: HTH_31 Location: 354108-354300 bp Feature: domain Description: HTH_31 Location: 3541 08-354300 bp Feature: gene Location: 354523-356058 bp Ori: TWU08886.1 Gene: hsdM_1 Feature: domain Description: HsdM Location: 354565-356032 bp Feature: domain Description: HsdM Location: 354565-356032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-UG16, HTH_31 (pfam13560), HsdM (COG0286)

Seq: SJPP01000003.1 Planctomycetes bacterium CA54 CA54_contig00003, whole genome shotgun sequence (1039425 bp)
Overview 1 RT 1: 685622-691041 bp Neighborhood of RT #1 [685622, 691046] PRK05808 RVT-Retrons S2P-M50_SpoIVFB GckA Feature: gene Location: 685622-686470 bp Ori: TWU07116.1 Gene: mmgB Feature: domain Description: PRK05808 Location: 685625-686468 bp Feature: domain Description: PRK05808 Location: 68562 5-686468 bp Feature: gene Location: 686618-686788 bp Feature: gene Location: 687086-688375 bp Ori: TWU07118.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 687521-688142 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68752 1-688142 bp Feature: gene Location: 688998-689690 bp Ori: TWU07119.1 Gene: spoIVFB Feature: domain Description: S2P-M50_SpoIVFB Location: 689067-689652 bp Feature: domain Description: S2 P-M50_SpoIVFB Location: 689067-689652 bp Feature: gene Location: 689694-691046 bp Ori: TWU07120.1 Gene: ttuD Feature: domain Description: GckA Location: 689730-691041 bp Feature: domain Description: GckA Location: 689730-691041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05808 (3-hydroxybutyryl-CoA dehydrogenase; Validated), RVT-Retrons, S2P-M50_SpoIVFB (cd06161), GckA (COG2379)