myRT

myRT report for GCA_007989845.1_ASM798984v1

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Seq: BJTZ01000018.1 Aliivibrio fischeri NBRC 101058 DNA, sequence018, whole genome shotgun sequence (85922 bp)
Overview 1 RT 1: 37145-40486 bp Neighborhood of RT #1 [37145, 40486] SLATT_5 RVT-UG17 Phage_holin_2_3 Feature: gene Location: 37145-37330 bp Feature: gene Location: 37675-38250 bp Feature: domain Description: SLATT_5 Location: 37699-38236 bp Feature: domain Description: SLATT_5 Location: 37699-38236 bp Feature: gene Location: 38172-39566 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38472-39054 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 38472-39054 bp Feature: gene Location: 39746-39922 bp Feature: domain Description: Phage_holin_2_3 Location: 39755-39893 bp Feature: domain Description: Phage_holin_2_3 Location: 39755-39893 bp Feature: gene Location: 40028-40486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Phage_holin_2_3 (pfam16080)

Seq: BJTZ01000026.1 Aliivibrio fischeri NBRC 101058 DNA, sequence026, whole genome shotgun sequence (64429 bp)
Overview 1 RT 1: 37633-48935 bp Neighborhood of RT #1 [37633, 48967] Phage_TAC_7 SMC_prok_A LigD_Pol_like RVT-UG10 RND_mfp Feature: gene Location: 37633-37902 bp Feature: domain Description: Phage_TAC_7 Location: 37654-37885 bp Feature: domain Description: Phage_TAC_7 Location: 37654-37885 bp Feature: gene Location: 38076-39962 bp Feature: domain Description: SMC_prok_A Location: 38190-38766 bp Feature: domain Description: SMC_prok_A Location: 38190-38766 bp Feature: gene Location: 40486-46017 bp Feature: domain Description: LigD_Pol_like Location: 40735-40930 bp Feature: domain Description: LigD_Pol_like Location: 40735-40930 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 41836-42493 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 41836-42 493 bp Feature: gene Location: 47141-47329 bp Feature: gene Location: 47921-48967 bp Feature: domain Description: RND_mfp Location: 48029-48935 bp Feature: domain Description: RND_mfp Location: 4802 9-48935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_TAC_7 (pfam10109), SMC_prok_A (TIGR02169), LigD_Pol_like (cd04861), RVT-UG10, RND_mfp (TIGR01730)

Seq: BJTZ01000070.1 Aliivibrio fischeri NBRC 101058 DNA, sequence070, whole genome shotgun sequence (4548 bp)
Overview 1 RT 1: 2154-4544 bp Neighborhood of RT #1 [2154, 4546] Mrr_cat RVT-Retrons Feature: gene Location: 2154-3011 bp Feature: domain Description: Mrr_cat Location: 2295-2508 bp Feature: domain Description: Mrr_cat Location: 2295-2508 bp Feature: gene Location: 3168-4085 bp Feature: gene Location: 4238-4546 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4403-4544 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4403 -4544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr_cat (pfam04471), RVT-Retrons

Seq: BJTZ01000083.1 Aliivibrio fischeri NBRC 101058 DNA, sequence083, whole genome shotgun sequence (2455 bp)
Overview 1 RT 1: 41-2198 bp Neighborhood of RT #1 [41, 2209] RVT-GII AmpD Feature: gene Location: 41-397 bp Feature: gene Location: 504-791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 510-687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 510-687 bp Feature: gene Location: 1439-2209 bp Feature: domain Description: AmpD Location: 1460-2198 bp Feature: domain Description: AmpD Location: 14 60-2198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AmpD (COG3023)

Seq: BJTZ01000131.1 Aliivibrio fischeri NBRC 101058 DNA, sequence131, whole genome shotgun sequence (910 bp)
Overview 1 RT 1: 2-425 bp Neighborhood of RT #1 [2, 688] RVT-Retrons Feature: gene Location: 2-688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8-425 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8-425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons