myRT

myRT report for GCA_007991135.1_ASM799113v1

Download annotations/find similar RTs

Seq: BJXT01000018.1 Lactobacillus acidipiscis NBRC 102163 DNA, sequence018, whole genome shotgun sequence (104435 bp)
Overview 1 RT 1: 61711-68340 bp Neighborhood of RT #1 [61711, 68340] AAA_15 TOPRIM_OLD DEXQc_UvrD DEXQc_UvrD UvrD RVT-Retrons RVT-Retrons Feature: gene Location: 61711-63780 bp Feature: domain Description: AAA_15 Location: 61714-62914 bp Feature: domain Description: AAA_1 5 Location: 61 71 4-6291 4 bp Feature: domain Description: TOPRIM_OLD Location: 63070-63400 bp Feature: domain Description: TOPRIM_OLD Location: 63070-63400 bp Feature: gene Location: 63762-65678 bp Feature: domain Description: DEXQc_UvrD Location: 63801-64125 bp Feature: domain Description: DEXQc_UvrD Location: 63801 -641 25 bp Feature: domain Description: DEXQc_UvrD Location: 64161-64428 bp Feature: domain Description: DEXQc_UvrD Location: 641 61 -64428 bp Feature: domain Description: UvrD Location: 65394-65613 bp Feature: domain Description: UvrD Location: 65394-6561 3 bp Feature: gene Location: 66040-66354 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66070-66322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66070-66322 bp Feature: gene Location: 66438-66719 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66441-66645 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66441 -66645 bp Feature: gene Location: 66742-66972 bp Feature: gene Location: 68140-68340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), TOPRIM_OLD (cd01026), DEXQc_UvrD (cd17932), UvrD (COG0210), RVT-Retrons

Seq: BJXT01000020.1 Lactobacillus acidipiscis NBRC 102163 DNA, sequence020, whole genome shotgun sequence (101628 bp)
Overview 1 RT 1: 19560-23373 bp Neighborhood of RT #1 [19560, 23378] RadC RVT-GII RVT-GII HNHc RadC CspC Feature: gene Location: 19560-20111 bp Feature: domain Description: RadC Location: 19581-20094 bp Feature: domain Description: RadC Location: 19581-2 0094 bp Feature: gene Location: 20202-20534 bp Feature: gene Location: 20848-21345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21145-21337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1145-2 1337 bp Feature: gene Location: 21418-22767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21427-21886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 142 7-2 1886 bp Feature: domain Description: HNHc Note: nucleases Location: 22471-22618 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 471-2 2 618 bp Feature: gene Location: 22825-23028 bp Feature: domain Description: RadC Location: 22876-23014 bp Feature: domain Description: RadC Location: 2 2 876-2 3014 bp Feature: gene Location: 23178-23378 bp Feature: domain Description: CspC Location: 23181-23373 bp Feature: domain Description: CspC Location: 2 3181-2 3373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), RVT-GII, HNHc (smart00507), CspC (COG1278)