myRT

myRT report for GCA_007991775.1_ASM799177v1

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Seq: BJYZ01000080.1 Skermanella aerolata NBRC 106429 DNA, sequence080, whole genome shotgun sequence (10924 bp)
Overview 1 RT 1: 2730-8910 bp Neighborhood of RT #1 [2730, 8910] INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII COG3547 Feature: gene Location: 2730-3719 bp Feature: domain Description: INT_RitB_C_like Location: 3099-3678 bp Feature: domain Description: INT_RitB_C_like Location: 3099-3678 bp Feature: gene Location: 3716-4993 bp Feature: domain Description: Phage_int_SAM_1 Location: 4121-4358 bp Feature: domain Description: Phage_int_SAM_1 Location: 41 21 -4358 bp Feature: domain Description: INT_RitA_C_like Location: 4439-4970 bp Feature: domain Description: INT_RitA_C_like Location: 4439-4970 bp Feature: gene Location: 5650-6894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6061-6751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6061 -6751 bp Feature: gene Location: 7368-8525 bp Feature: domain Description: COG3547 Location: 7563-8478 bp Feature: domain Description: COG3547 Location: 7563-8478 bp Feature: gene Location: 8593-8910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), RVT-GII, COG3547 (Transposase )

Seq: BJYZ01000083.1 Skermanella aerolata NBRC 106429 DNA, sequence083, whole genome shotgun sequence (10191 bp)
Overview 1 RT 1: 111-3424 bp Neighborhood of RT #1 [111, 3424] RVT-GII Rve Feature: gene Location: 111-737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 0-330 bp Feature: gene Location: 1452-1805 bp Feature: domain Description: Rve Location: 1584-1803 bp Feature: domain Description: Rve Location: 1584-1803 bp Feature: gene Location: 1976-3424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Rve (COG3316)

Seq: BJYZ01000154.1 Skermanella aerolata NBRC 106429 DNA, sequence154, whole genome shotgun sequence (1873 bp)
Overview 1 RT 1: 539-1718 bp Neighborhood of RT #1 [539, 1792] RVT-GII GIIM Feature: gene Location: 539-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1412 bp Feature: domain Description: GIIM Note: maturase Location: 1496-1718 bp Feature: domain Description: GIIM Note: maturase Location: 1496-1718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)