myRT

myRT report for GCA_007992855.1_ASM799285v1

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Seq: BKBB01000003.1 Clostridium butyricum NBRC 3315 DNA, sequence03, whole genome shotgun sequence (75078 bp)
Overview 1 RT 1: 38044-46664 bp Neighborhood of RT #1 [38044, 46664] MarR ADA RVT-Retrons Feature: gene Location: 38044-38487 bp Feature: domain Description: MarR Location: 38101-38476 bp Feature: domain Description: MarR Location: 381 01 -38476 bp Feature: gene Location: 38834-39826 bp Feature: domain Description: ADA Location: 38849-39818 bp Feature: domain Description: ADA Location: 38849-3981 8 bp Feature: gene Location: 40415-41923 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41051-41699 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 051 -41 699 bp Feature: gene Location: 41920-43728 bp Feature: gene Location: 43728-46664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MarR (pfam01047), ADA (cd01320), RVT-Retrons

Seq: BKBB01000017.1 Clostridium butyricum NBRC 3315 DNA, sequence17, whole genome shotgun sequence (135990 bp)
Overview 1 RT 1: 81915-88956 bp Neighborhood of RT #1 [81915, 89426] RES PinE RVT-UG5 nitrilase MoaF MoaF_C HTH_BmrR Feature: gene Location: 81915-82937 bp Feature: domain Description: RES Location: 82404-82917 bp Feature: domain Description: RES Location: 82 404-82 917 bp Feature: gene Location: 83012-83626 bp Feature: domain Description: PinE Location: 83024-83594 bp Feature: domain Description: PinE Location: 8302 4-83594 bp Feature: gene Location: 83917-86904 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84418-84928 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84418-8492 8 bp Feature: domain Description: nitrilase Location: 86089-86752 bp Feature: domain Description: nitrilase Location: 86089-86752 bp Feature: gene Location: 87758-88585 bp Feature: domain Description: MoaF Location: 87782-88106 bp Feature: domain Description: MoaF Location: 87782 -88106 bp Feature: domain Description: MoaF_C Location: 88229-88571 bp Feature: domain Description: MoaF_C Location: 882 2 9-88571 bp Feature: gene Location: 88617-89426 bp Feature: domain Description: HTH_BmrR Location: 88632-88956 bp Feature: domain Description: HTH_BmrR Location: 88632 -88956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RES (smart00953), PinE (COG1961), RVT-UG5, nitrilase (cl11424), MoaF (pfam10703), MoaF_C (pfam17409), HTH_BmrR (cd01107)

Seq: BKBB01000026.1 Clostridium butyricum NBRC 3315 DNA, sequence26, whole genome shotgun sequence (67037 bp)
Overview 1 RT 1: 59-2951 bp Neighborhood of RT #1 [59, 2968] RVT-GII GalU TraX Feature: gene Location: 59-631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224-437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224-43 7 bp Feature: gene Location: 942-1856 bp Feature: domain Description: GalU Location: 966-1824 bp Feature: domain Description: GalU Location: 966-1824 bp Feature: gene Location: 2150-2968 bp Feature: domain Description: TraX Location: 2180-2951 bp Feature: domain Description: TraX Location: 2180-2951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GalU (COG1210), TraX (pfam05857)