myRT

myRT report for GCA_007997345.1_ASM799734v1

Download annotations/find similar RTs

Seq: VOSR01001093.1 Mitsuaria sp. TWR114 Contigs.5-TWR114_contig_1093, whole genome shotgun sequence (8843 bp)
Overview 1 RT 1: 1688-8842 bp Neighborhood of RT #1 [1688, 8842] Amidohydro_2 YitT RVT-Retrons Feature: gene Location: 1688-2716 bp Feature: domain Description: Amidohydro_2 Location: 1697-2681 bp Feature: domain Description: Amidohydro_2 Location: 1 697-2681 bp Feature: gene Location: 2793-3476 bp Feature: domain Description: YitT Location: 2895-3465 bp Feature: domain Description: YitT Location: 2895-3465 bp Feature: gene Location: 3608-5401 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4160-4781 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 60-4781 bp Feature: gene Location: 5718-7445 bp Feature: gene Location: 7451-8842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Amidohydro_2 (pfam04909), YitT (COG1284), RVT-Retrons

Seq: VOSR01000047.1 Mitsuaria sp. TWR114 Contigs.5-TWR114_contig_47, whole genome shotgun sequence (68283 bp)
Overview 1 RT 1: 36044-48053 bp Neighborhood of RT #1 [36044, 48109] HsdM RVT-UG1 DUF262 DUF262 COG3472 Feature: gene Location: 36044-40954 bp Feature: domain Description: HsdM Location: 37370-37691 bp Feature: domain Description: HsdM Location: 37370-37691 bp Feature: gene Location: 40964-42952 bp Feature: gene Location: 42996-46826 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 43641-44169 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 43641-44169 bp Feature: gene Location: 46842-47117 bp Feature: domain Description: DUF262 Location: 46896-47046 bp Feature: domain Description: DUF2 62 Location: 46896-47046 bp Feature: gene Location: 47150-48109 bp Feature: domain Description: DUF262 Location: 47303-47516 bp Feature: domain Description: DUF2 62 Location: 47303-47516 bp Feature: domain Description: COG3472 Location: 47555-48053 bp Feature: domain Description: COG3472 Location: 47555-48053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-UG1, DUF262 (pfam03235), COG3472 (Uncharacterized protein )

Seq: VOSR01000563.1 Mitsuaria sp. TWR114 Contigs.5-TWR114_contig_563, whole genome shotgun sequence (4382 bp)
Overview 1 RT 1: 2-4252 bp Neighborhood of RT #1 [2, 4380] RVT-Retrons PBP2_CrgA_like_3 Feature: gene Location: 2-1276 bp Feature: gene Location: 1790-3031 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2162-2789 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2162-2789 bp Feature: gene Location: 3508-4380 bp Feature: domain Description: PBP2_CrgA_like_3 Location: 3643-4252 bp Feature: domain Description: PBP2_CrgA_like_3 Location: 3 643 -4252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PBP2_CrgA_like_3 (cd08472)