myRT

myRT report for GCA_008011925.1_ASM801192v1

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Seq: SSDR01000216.1 Zoogloea sp. isolate Bin_21_1 c_000000020236, whole genome shotgun sequence (7064 bp)
Overview 1 RT 1: 4188-6362 bp Neighborhood of RT #1 [4188, 6514] RpoE COG4315 RVT-GII GIIM Feature: gene Location: 4188-4688 bp Feature: domain Description: RpoE Location: 4194-4656 bp Feature: domain Description: RpoE Location: 41 94-4656 bp Feature: gene Location: 4695-5084 bp Feature: domain Description: COG4315 Location: 4737-5082 bp Feature: domain Description: COG431 5 Location: 4737-5082 bp Feature: gene Location: 5315-6514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5480-6095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5480-6095 bp Feature: domain Description: GIIM Note: maturase Location: 6152-6362 bp Feature: domain Description: GIIM Note: maturase Location: 61 52-6362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoE (COG3343), COG4315 (Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown) ), RVT-GII, GIIM (pfam08388)

Seq: SSDR01000227.1 Zoogloea sp. isolate Bin_21_1 c_000000098191, whole genome shotgun sequence (12330 bp)
Overview 1 RT 1: 92-2702 bp Neighborhood of RT #1 [92, 2710] RVT-DGRs YacG PRK08999 Feature: gene Location: 92-1189 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 302-974 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 302 -974 bp Feature: gene Location: 1543-1749 bp Feature: domain Description: YacG Location: 1573-1720 bp Feature: domain Description: YacG Location: 1573-172 0 bp Feature: gene Location: 1772-2710 bp Feature: domain Description: PRK08999 Location: 1778-2702 bp Feature: domain Description: PRK08999 Location: 1778-2 702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YacG (pfam03884), PRK08999 (Nudix family hydrolase), RVT-DGRs