myRT

myRT report for GCA_008012095.1_ASM801209v1

Download annotations/find similar RTs

Seq: SSEA01000098.1 Sinobacteraceae bacterium isolate Bin_59_2 c_000000033212, whole genome shotgun sequence (41911 bp)
Overview 1 RT 1: 16110-22721 bp Neighborhood of RT #1 [16110, 22721] RVT-GII Intron_maturas2 IstB_IS21_ATP IstB_IS21 COG4584 COG4584 RVT-GII Feature: gene Location: 16110-16463 bp Feature: gene Location: 16390-16803 bp Feature: gene Location: 17059-18147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17188-17380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 88-1 7380 bp Feature: domain Description: Intron_maturas2 Location: 17500-17773 bp Feature: domain Description: Intron_maturas2 Location: 1 7500-1 7773 bp Feature: gene Location: 18184-18936 bp Feature: domain Description: IstB_IS21_ATP Location: 18259-18340 bp Feature: domain Description: IstB_IS21 _ATP Location: 1 8259-1 8340 bp Feature: domain Description: IstB_IS21 Location: 18343-18871 bp Feature: domain Description: IstB_IS21 Location: 1 8343-1 8871 bp Feature: gene Location: 18950-20593 bp Feature: domain Description: COG4584 Location: 19157-19970 bp Feature: domain Description: COG4584 Location: 1 91 57-1 9970 bp Feature: domain Description: COG4584 Location: 20042-20495 bp Feature: domain Description: COG4584 Location: 20042-20495 bp Feature: gene Location: 20613-21551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20880-21369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20880-21 369 bp Feature: gene Location: 21984-22112 bp Feature: gene Location: 22512-22721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase )

Seq: SSEA01000097.1 Sinobacteraceae bacterium isolate Bin_59_2 c_000000101834, whole genome shotgun sequence (19943 bp)
Overview 1 RT 1: 11465-14777 bp Neighborhood of RT #1 [11465, 14785] DUF1566 Avd_like RVT-DGRs Dcm Dcm Dcm Feature: gene Location: 11465-12082 bp Feature: domain Description: DUF1566 Location: 11702-12065 bp Feature: domain Description: DUF1566 Location: 11702 -12 065 bp Feature: gene Location: 12135-12491 bp Feature: domain Description: Avd_like Location: 12162-12471 bp Feature: domain Description: Avd_like Location: 12 162 -12 471 bp Feature: gene Location: 12737-13849 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12941-13697 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 941-13697 bp Feature: gene Location: 13862-14038 bp Feature: domain Description: Dcm Location: 13868-14030 bp Feature: domain Description: Dcm Location: 13868-14030 bp Feature: gene Location: 14042-14785 bp Feature: domain Description: Dcm Location: 14051-14453 bp Feature: domain Description: Dcm Location: 14051-14453 bp Feature: domain Description: Dcm Location: 14627-14777 bp Feature: domain Description: Dcm Location: 1462 7-14777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, Dcm (COG0270)

Seq: SSEA01000027.1 Sinobacteraceae bacterium isolate Bin_59_2 c_000000130127, whole genome shotgun sequence (51996 bp)
Overview 1 RT 1: 46840-49615 bp Neighborhood of RT #1 [46840, 49615] RVT-GII GIIM Feature: gene Location: 46840-47022 bp Feature: gene Location: 47170-47355 bp Feature: gene Location: 47490-48911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47847-48462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47847-48462 bp Feature: domain Description: GIIM Note: maturase Location: 48519-48744 bp Feature: domain Description: GIIM Note: maturase Location: 48519-48744 bp Feature: gene Location: 49062-49280 bp Feature: gene Location: 49313-49615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SSEA01000044.1 Sinobacteraceae bacterium isolate Bin_59_2 c_000000133767, whole genome shotgun sequence (38649 bp)
Overview 1 RT 1: 16680-22711 bp Neighborhood of RT #1 [16680, 22711] 2A0601 RVT-GII GIIM DUF2790 Feature: gene Location: 16680-19841 bp Feature: domain Description: 2A0601 Location: 16683-19827 bp Feature: domain Description: 2A0601 Location: 16683-19827 bp Feature: gene Location: 19994-20290 bp Feature: gene Location: 20317-21738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20674-21289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20674 -21289 bp Feature: domain Description: GIIM Note: maturase Location: 21346-21571 bp Feature: domain Description: GIIM Note: maturase Location: 2134 6-21571 bp Feature: gene Location: 21921-22244 bp Feature: domain Description: DUF2790 Location: 22026-22230 bp Feature: domain Description: DUF2790 Location: 22026-22230 bp Feature: gene Location: 22529-22711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2A0601 (TIGR00914), RVT-GII, GIIM (pfam08388), DUF2790 (pfam10976)

Seq: SSEA01000017.1 Sinobacteraceae bacterium isolate Bin_59_2 c_000000140685, whole genome shotgun sequence (42347 bp)
Overview 1 RT 1: 27358-32178 bp Neighborhood of RT #1 [27358, 32207] MHYT PRK10060 RVT-GII GIIM RDD Feature: gene Location: 27358-29427 bp Feature: domain Description: MHYT Location: 27367-28066 bp Feature: domain Description: MHYT Location: 27367-28066 bp Feature: domain Description: PRK10060 Location: 28111-29401 bp Feature: domain Description: PRK10060 Location: 28111-29401 bp Feature: gene Location: 29535-29684 bp Feature: gene Location: 29785-31176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30112-30727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30112-30727 bp Feature: domain Description: GIIM Note: maturase Location: 30781-31009 bp Feature: domain Description: GIIM Note: maturase Location: 30781-31009 bp Feature: gene Location: 31342-31527 bp Feature: gene Location: 31683-32207 bp Feature: domain Description: RDD Location: 31713-32178 bp Feature: domain Description: RDD Location: 31713-32178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MHYT (pfam03707), PRK10060 (cyclic di-GMP phosphodiesterase), RVT-GII, GIIM (pfam08388), RDD (pfam06271)